Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00080 ATGGAACAAATGGCACTACATGAGGCCGATATTGGTCTTTCAATGGGTTTCCAAAGTTTCCAAAGTACAGAAGTTGCTAAAGAGAGCTCTGATGTCATTTGGGATGACAATTTTGCTTCAGTTGTGAAGAAGGTAATCCTTATGAACTATACCTTCATTAATTTCTCAACAGCTTCTCTGGGTAAATTGGATACTCTTGGAGCATTGGCCTTGGCAACTGAACCCCCACCAATTGATTCCCTGATGGATCAAAGTCCATTGGATCGAAGAACCTCTTGTATCAAATATTATGTGGAGGAATCTGCTCATACAGGTGAATTCTGTTTCTCGTTTAGTAGCACCTCTGTTGTCATTGAAGCTGGCAAGGATTTTATTTTGATGTGGACCAAGCCACAAATAACTAACTAA 408 0.3995 MEQMALHEADIGLSMGFQSFQSTEVAKESSDVIWDDNFASVVKKVILMNYTFINFSTASLGKLDTLGALALATEPPPIDSLMDQSPLDRRTSCIKYYVEESAHTGEFCFSFSSTSVVIEAGKDFILMWTKPQITN 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00080 135 PANTHER CALCIUM-TRANSPORTING ATPASE 63 93 - -
Gma10g00080 135 PANTHER CALCIUM-TRANSPORTING ATPASE 4 47 - -
Gma10g00080 135 PANTHER CATION TRANSPORTING ATPASE 63 93 - -
Gma10g00080 135 PANTHER CATION TRANSPORTING ATPASE 4 47 - -
Gma10g00080 135 Gene3D - 5 43 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00080 Gma-Chr10 785150 786678 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00080 5 94 Primary Pumps ATPases AT4G29900 45.600 3.08e-17 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00080 K01537 - pda:103709221 72.0182