Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00069 ATGGATAGTTCCTCTCATCAGCTCCTCCCCTTCAACGAAAACGACCCAGAAGACATGCTTCTCTATGGCATCATCACTTCATGCCAAGAAAAAAAAGTGACCATCAACCAAGAGCAAGTGAATAAGAAGAGGAGCAGCTTCCGCGGCGTGCGGAGGCGGCCGTGGGGGAAGTTCGCGGCGGAGATAAGAGACTCCACGCGGCATGGCGTGAGGGTGTGGCTTGGGACATTCGACAACGCCGAGGCCGCCGCGCTGGCGTATGACCAAGCCGCATTCTCCATGAGGGGCTCCGGCGCGGTGCTCAACTTCCCCGTGGAGAAGGTGAAGGAGTCTCTTAGAGACATGAAGCTTGATGGATGCTCTCCCGTTGTGGCCTTGAAGAGGAGACACTCCTTGGCTGCTAAGAGGAAGAAGGAAGATGTCCTTGTTTTCCATGACCTTGGGGCTGATTATTTGGAACACTTGTTGATGTGCTCTGATCTACCTAGTACAACCATTGTTTAA 504 0.5337 MDSSSHQLLPFNENDPEDMLLYGIITSCQEKKVTINQEQVNKKRSSFRGVRRRPWGKFAAEIRDSTRHGVRVWLGTFDNAEAAALAYDQAAFSMRGSGAVLNFPVEKVKESLRDMKLDGCSPVVALKRRHSLAAKRKKEDVLVFHDLGADYLEHLLMCSDLPSTTIV 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00069 167 Pfam AP2 domain 46 96 IPR001471 GO:0003700|GO:0006355
Gma10g00069 167 CDD AP2 45 105 IPR001471 GO:0003700|GO:0006355
Gma10g00069 167 ProSiteProfiles AP2/ERF domain profile. 46 104 IPR001471 GO:0003700|GO:0006355
Gma10g00069 167 PANTHER DNA-BINDING DOMAIN 5 160 IPR044808 GO:0003700|GO:0009873
Gma10g00069 167 SMART rav1_2 46 110 IPR001471 GO:0003700|GO:0006355
Gma10g00069 167 SUPERFAMILY DNA-binding domain 45 106 IPR016177 GO:0003677
Gma10g00069 167 PRINTS Ethylene responsive element binding protein signature 47 58 IPR001471 GO:0003700|GO:0006355
Gma10g00069 167 PRINTS Ethylene responsive element binding protein signature 86 106 IPR001471 GO:0003700|GO:0006355
Gma10g00069 167 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B 5 160 - -
Gma10g00069 167 Gene3D AP2/ERF domain 46 106 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00069 Gma-Chr10 699609 700595 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00069 9 164 AP2-EREBP Transcription Factor Family AT3G23240 54.945 6.59e-62 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Gma10g00069 AP2 1.8e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00069 K14516 - gmx:100785936 331.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00069 10 699609 700595 Gma10g00069 10 699609 700595 ECH
Gma10g00069 10 699609 700595 Gma02g00056 02 687552 688349 GST
Gma03g01494 03 41172349 41173335 Gma10g00069 10 699609 700595 PCT