Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gma10g00062 | ATGGCAGATCTTTCTAGCTACGGGAGTCATGAGCGCGATATTGAACAAGCATTCATTACTTTGAAAAAGGGCACTCAGTTAGTAAAGTATAGTCGAAAAGGGAAGCCAAAACTCTGTACATTCAGGATCTCATCGGATGAAACGAAACTGATTTGGATATCTCATGGAAGGGAAAAGAATCTAAAATTGTCTTCTGTTTCACGCATCATCCCAGGACAGAGAACAGCTGTCTTTAGAAGATACTTGCGCCCTGAAAAGGATTATCTGTCATTTTCACTTATTTATAAAAAGGGGGAACGGTCACTTGATCTGATTTGCAAGAACCAAGCTGAGGTAGAGGTATGGTTTTCAAGCCTTAAGGCATTAATTTCCCCTGGAGAGCGTATTAGGCGTGGAACAAGTGATTTATCCAATGATAGTGTTGACTTAATTCCAAATGATCGTCCTTATGCTGGAACACTAGAGTTTGCATCAAGCATTGCCCGTGGCAGGTTTTCTTTTGAATCAGTGTCTCATGAATCTACATCATCTTGGTCTAGATCAGAAACAAATATGCCAGTAAGGACAAGTTGTGGAGATGGTTCGCGTGTTAGTGTATCAAGTGTTAGTCACTCAAGTAGCGTAGGATCAGGACTAGATGACATAGAATCTCTAGGTGATGTTTATATATGGGGAGAGGTTTGGGCAGATGGCAATTCATTTGATGGATTGGGGAGTCAACTTCAAGCCTTTTGTAAGACAGATGTGCTGACTCCTAAACCGTTGGAGTCTGATGTTGTTCTTGATGTTCATCAGATTGGTCCTGGTGATCGTCACATTGCTCTAGTTACAAGGCAAGGAGAGGTTTTTACTTGGGGAGAGGATTCTGGTGGAAGACTTGGTCATGGATTTGAAAAAGATTTCGGTCGACCTCATCTTGTGGAATCCCTGGCAATTACCAATGTGACTTTTGTTGCGTGTGGCGAGTATCATTCTTGTGCTGTGTCCACATCTGGTGACCTATTCACCTGGGGTGATGGTACACATGGTGCAGGACTTCTTGGTCATGGCACTGATGTTAGCTACTGGATACCAAAAAGGGTTAGTGGCCCTTTAGAGGGACTTCAGGTTGTAGCTGTAGCATGTGGAACATGGCATTCAGCATTAGCAACCTCCAATGGTAAGTTGTTTACCTTTGGTGATGGAAGATTTGGTGTATTGGGCCATGGAAACCGAGCGAGTGTGGCATATCCAAAGGAGGTACAATTATTGAGTGGATACAAGGCTATTAAGGTTGCATGTGGAGTGTGGCACTCAGCAGCCATTATAGATGTTATGGATCTTTCTGGTTCAAAGGCTTCAGCCAAGAGGCTCTTCACGTGGGGTGATGGTGACCAATATCGTTTGGGTCATGCTAACAAGGAAACTTACCTTGAACCAACTTGTGTAGCTGCAGTTGCTGAATATAATTTTCACCAGGTTGCATGTGGGTACACTATGACTGTTGCACTCACTGCATCTGGTCATGTTTTTAGCATGGGAGGCACAACATATGGTCAACTAGGAAATCCAAATTCTGATGGAAAAGTGCCGATTCTAGTGCGAGATAAGTTAGTAGGAGAGTTTGTGGAGGAAATATCATGTGGTGCCAATCATGTTGCTGTGTTGACTTCAAGAAGTGAGCTATATACTTGGGGGAGAGGTGCCAATGGAAGACTAGGACATGGAGACACAGATGATAAGAAATCTCCAACATTGGTGGAAGCCTTGAAAGACAGGCATGTTAAGAACATCTCATGTGGCTCGACCTTTACATCTTGCATATGCTTACATAAATGGGTTTCTGGAGTTGACCAATCTGTTTGCTCTGATTGTCGACAACCATTTGGTTTCACCCGAAAAAGGCACAATTGCTATCATTGTGGGTTGGTATATTGCCATCCTTGTAGTTCAAAAAAGGCATCAAAAGCAGCACTGGCTCCAACACCTAGCAAACCACATCGTGTGTGTGATGCTTGTTATGCTAAGCTAAAAGGTTCTGATAGTGCTTCCGATTTTAATAGGGAAATTAGTCGTCCTTCTAGTTCCGTATATGGAAGGGAAAGTTTTCACCGGGGAGAGGTAAGGTCTTCAAGAGTTCTCTTGCCTCCTACCACAGAACCGGTAAAATACCTAGAGATTAGGACTAATAAGCCTGGAAATATGCATGACTTTTCTTCCATAGTCCGAGCTGCTCAAGTTCCTACCAGTTTACAATTGAAAGATGTTGCATTTCCAATTTCGTTGAGTTCTGCGCAGAATGTTTACAAACCTGTTATACAGCCAACTCCACCAACACCGGCTACTCCAATACCTATGTCACCATATGCTAGAAGACCACCCAGTCCACCGCGTTCTACCTCCCCTGGATTTTCAAGAAGCCTTATTGATAATTTAAGGAAGAAAAATGATCATTTGAATCAACAAGTCTCAAAATGGCAAAACAATAATCAAAATTTGAAGCAGAAGAGTGACATGCAAGACATGAAGATTCGGGAGCTTCAGAAAAATATTGAAGAAGCCGTGTCACGAGTTGGAGAGGAATCTTCTAAGCTTAGAAAAGCAAAGGAATTAATTAAGTCCTTGACAGATAAGTTGAGGGAAGTGACTGAGAAGTTGCCACTTGAGATTCCGGACAACGAGACCTTGAGAACCATGCATGCTCAAGCTGAAGAATTTCTTCATGAAGAAAAAGATTTTGAATCTTCTTCCTCCCCACAGAGCCTTGAGTCTGAGCAACAAAGTGCACCTGATGTACCTGCCTCAGAAAGCGACTCTTCAAAACTCCAAGAGCAAAGAATGGAAGGAAATGATGATGCTTTTGGGGTTGTTCCATCTATAGATGGAGAAAATATTCTTGAAGAAAGCAGCAACTCATCTGTATCTGGTCCAGTAGTGACTTCGCCAAGCTCAGGAAATGGTTCAAAATTACGTGACACTGGTATACCTGTGACAGAAGGAGAAAAATCAGTCATTGAACAATTTGAGCATGGTGTTTATGTCACACTCGTAGTACTACCTCGTGGTTACAAAGTTTTCAAACGAATTAGATTCAGTAAACGGAGATTCAACGAGAAGCAAGCAGAAGAATGGTGGAACCAAAACAAAGATAAGGTGCATAGTAAATACAATTTACCAATCACAAAGAATGCAACTACTGGATCATCTATCATACCTCCACAAGCTGAAGAAAAATGTGAGGCATTACCTTCTTCCTAA | 3237 | 0.4217 | MADLSSYGSHERDIEQAFITLKKGTQLVKYSRKGKPKLCTFRISSDETKLIWISHGREKNLKLSSVSRIIPGQRTAVFRRYLRPEKDYLSFSLIYKKGERSLDLICKNQAEVEVWFSSLKALISPGERIRRGTSDLSNDSVDLIPNDRPYAGTLEFASSIARGRFSFESVSHESTSSWSRSETNMPVRTSCGDGSRVSVSSVSHSSSVGSGLDDIESLGDVYIWGEVWADGNSFDGLGSQLQAFCKTDVLTPKPLESDVVLDVHQIGPGDRHIALVTRQGEVFTWGEDSGGRLGHGFEKDFGRPHLVESLAITNVTFVACGEYHSCAVSTSGDLFTWGDGTHGAGLLGHGTDVSYWIPKRVSGPLEGLQVVAVACGTWHSALATSNGKLFTFGDGRFGVLGHGNRASVAYPKEVQLLSGYKAIKVACGVWHSAAIIDVMDLSGSKASAKRLFTWGDGDQYRLGHANKETYLEPTCVAAVAEYNFHQVACGYTMTVALTASGHVFSMGGTTYGQLGNPNSDGKVPILVRDKLVGEFVEEISCGANHVAVLTSRSELYTWGRGANGRLGHGDTDDKKSPTLVEALKDRHVKNISCGSTFTSCICLHKWVSGVDQSVCSDCRQPFGFTRKRHNCYHCGLVYCHPCSSKKASKAALAPTPSKPHRVCDACYAKLKGSDSASDFNREISRPSSSVYGRESFHRGEVRSSRVLLPPTTEPVKYLEIRTNKPGNMHDFSSIVRAAQVPTSLQLKDVAFPISLSSAQNVYKPVIQPTPPTPATPIPMSPYARRPPSPPRSTSPGFSRSLIDNLRKKNDHLNQQVSKWQNNNQNLKQKSDMQDMKIRELQKNIEEAVSRVGEESSKLRKAKELIKSLTDKLREVTEKLPLEIPDNETLRTMHAQAEEFLHEEKDFESSSSPQSLESEQQSAPDVPASESDSSKLQEQRMEGNDDAFGVVPSIDGENILEESSNSSVSGPVVTSPSSGNGSKLRDTGIPVTEGEKSVIEQFEHGVYVTLVVLPRGYKVFKRIRFSKRRFNEKQAEEWWNQNKDKVHSKYNLPITKNATTGSSIIPPQAEEKCEALPSS | 1078 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gma10g00062 | 1078 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 386 | 435 | IPR000408 | - | |
| Gma10g00062 | 1078 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 331 | 382 | IPR000408 | - | |
| Gma10g00062 | 1078 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 280 | 328 | IPR000408 | - | |
| Gma10g00062 | 1078 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 554 | 601 | IPR000408 | - | |
| Gma10g00062 | 1078 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 500 | 549 | IPR000408 | - | |
| Gma10g00062 | 1078 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 450 | 497 | IPR000408 | - | |
| Gma10g00062 | 1078 | Pfam | Transcription factor regulating root and shoot growth via Pin3 | 995 | 1049 | IPR013591 | - | |
| Gma10g00062 | 1078 | Gene3D | - | 13 | 130 | IPR011993 | - | |
| Gma10g00062 | 1078 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 449 | 500 | IPR000408 | - | |
| Gma10g00062 | 1078 | PANTHER | CHROMOSOME CONDENSATION REGULATOR RCC1 REPEAT PROTEIN | 12 | 1057 | - | - |
Showing 1 to 10 of 44 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gma10g00062 | - | - | gmx:100812689 | 2045.01 |
Showing 1 to 1 of 1 entries
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Gma10g00062 | 10 | 629381 | 636885 | Gma02g00049 | 02 | 598199 | 605604 | GST |
Showing 1 to 1 of 1 entries