Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00046 ATGCCTTTCAAGAGGTACGTTGAGATTGGAAGGGTTGCTCAGATCAACTATGGCAAAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGGGCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGGCTCTCGCTCACTGACATCAAGATTGATATTAAGAGGATTCCCAAGAAGAAGGATCTCATTCAAGCCATGGAGGCTGCTGATGTTAAGAACAGATGGGAGAAGAGTTCTTGGGGCAGAAAACTGATTGTGCAGAAGAGGAGGGCATCCCTCAATGACTTTGATAGGTTCAAGATAATGTTGGCAAAGATCAAGAGGGCAGCTGTTGTTAGGCAAGAGCTCGCTAAGCTGAAGAAAAGTGCCTAA 399 0.4662 MPFKRYVEIGRVAQINYGKEYGRLVIIVDVIDQNRALVDAPDMVRSQVNFKRLSLTDIKIDIKRIPKKKDLIQAMEAADVKNRWEKSSWGRKLIVQKRRASLNDFDRFKIMLAKIKRAAVVRQELAKLKKSA 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00046 132 PANTHER 60S RIBOSOMAL PROTEIN L14 1 132 IPR039660 GO:0003723|GO:0003735
Gma10g00046 132 Gene3D - 1 84 IPR014722 -
Gma10g00046 132 Gene3D - 92 127 - -
Gma10g00046 132 PANTHER RIBOSOMAL PROTEIN L14, PUTATIVE-RELATED 1 132 - -
Gma10g00046 132 Pfam Ribosomal protein L14 45 117 IPR002784 GO:0003735|GO:0005840|GO:0006412
Gma10g00046 132 SUPERFAMILY Translation proteins SH3-like domain 5 93 IPR008991 -
Gma10g00046 132 CDD KOW_RPL14 7 79 IPR041985 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00046 Gma-Chr10 437229 439063 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00046 1 131 Cytoplasmic Ribosomal Protein Gene Family AT4G27090 82.443 5.64e-76 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00046 K02875 - gmx:100808592 244.973