Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00045 ATGGGAATGAGAGATTTTCATATCAAGCTTAAGGCATTCCGGGTGAAACGTTTTTTCTTTGGAAGAAGGAGAAATAGATGGAGTGCAAACAAGCCTTCATGGATGATTCCAATATCACATGGTCATCATGTGGTGGAGCATCATGTAATCAAAGGTGGTTCTGATGACTCGAACTTCGATTCAGTTGTGATACAGAGAGAGCAAATGGATCACACAGAACTGTGGTACTTTGGAATCTTTGATACTGTAGTTGGAGATGAAGTTACCAAGTATATGCAATCCCATTTCTTTGGCAAGAAGCTCAAAGAGTGTCATATGAGGAGAAAAACCAAAGAAACACTGAAGAGAGCTTACCTAGGTGTAAAAACAAAGATCAGAGAGGCACACAAGCCAGAGGAGCTGGAGACATGCAGAATAGGCTCAACATCAGTGATGGTGATCAATGGAGAAAAGCTTGTGATAGTCAACATGGGAGATTACAGAACTGTTTTGTGCAGAAATGGTGTAGCTTATCAGACAACTGGCAGATACAATCAATCATCAGCCAAGAGACATTGGTATCGCAGACTCTTTTCAGTTCGGATGATAGCATGTGAATCAGGCAATACAAAAGGTACAAAGCATTCTAAAGGCTCAGAACTTGTGGTGGGAGGTGATAGAATCGATTCAGATACTGAGTTTTTAATCTTAGCAAGCAATGGCATATGGGAGGTGATGAAGAATCAAGAGGCTGTGAATCTTATAAGGCACATAGAGGATCCACAAGAAGCAGCTGAGTGCTTGGCAAAGGAAGCCTTGATTAGGATGAGCAAAAGCAACATTTCATGCTTAATCATTCGCTTTGACTGA 849 0.4111 MGMRDFHIKLKAFRVKRFFFGRRRNRWSANKPSWMIPISHGHHVVEHHVIKGGSDDSNFDSVVIQREQMDHTELWYFGIFDTVVGDEVTKYMQSHFFGKKLKECHMRRKTKETLKRAYLGVKTKIREAHKPEELETCRIGSTSVMVINGEKLVIVNMGDYRTVLCRNGVAYQTTGRYNQSSAKRHWYRRLFSVRMIACESGNTKGTKHSKGSELVVGGDRIDSDTEFLILASNGIWEVMKNQEAVNLIRHIEDPQEAAECLAKEALIRMSKSNISCLIIRFD 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00045 282 ProSiteProfiles PPM-type phosphatase domain profile. 56 281 IPR001932 -
Gma10g00045 282 Gene3D - 45 282 IPR036457 -
Gma10g00045 282 Pfam Protein phosphatase 2C 72 173 IPR001932 -
Gma10g00045 282 Pfam Protein phosphatase 2C 220 274 IPR001932 -
Gma10g00045 282 PANTHER ALPHABET, ISOFORM E-RELATED 6 281 - -
Gma10g00045 282 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 6 281 - -
Gma10g00045 282 SUPERFAMILY PP2C-like 43 282 IPR036457 -
Gma10g00045 282 SMART PP2C_4 32 279 IPR001932 -
Gma10g00045 282 CDD PP2Cc 51 281 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00045 Gma-Chr10 428581 431782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00045 1 281 PP2C-type Phosphatase Gene Family AT3G23360 46.127 2.23e-81 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00045 K19704 - gmx:100794054 564.303