Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00043 ATGGCCAACAACTTTTATAACAATGCACAATTTGCTGGATTTTATAACAACACCGACCCAAAAGGATGCCGGTTGTGCAACCAAGTTTTCACCGACACTCAGGCCCTTCTAACCCATGTTGAGTCTCACATGGCACAAGAAGAGGATTCACTTAGAAGGCTCAATTCATCACCACCAAATGTCAATTCTCAAATGCAATTGGGTTCACAACAGTTCCCACCACAACCTGCTATGGGTGATGGCAGGAATTTCCAAGCACAATCACAACCTATGAGGATGCCTCAACCAATTAGTAAAAACCCAATTTTCAATTCTAGCCAAATTGGCTCATCATCAACTCCAATCAGGCAAATGCAAGTTTCGCCACAAGCTTTTCCTTTTTCTGGAAGTATTAATGGTGATGGCTCTAAGCCATATATCTCGAAGTTGGAGAAACCCATCAAGAAGATTGATTTCATTGACTTGGTTAACATGGATGGCGATGACAACTTAGAGGTGGAAGCAATGGATTTGGATCTAAAGCTTTAG 528 0.4167 MANNFYNNAQFAGFYNNTDPKGCRLCNQVFTDTQALLTHVESHMAQEEDSLRRLNSSPPNVNSQMQLGSQQFPPQPAMGDGRNFQAQSQPMRMPQPISKNPIFNSSQIGSSSTPIRQMQVSPQAFPFSGSINGDGSKPYISKLEKPIKKIDFIDLVNMDGDDNLEVEAMDLDLKL 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00043 175 MobiDBLite consensus disorder prediction 51 66 - -
Gma10g00043 175 ProSiteProfiles Zinc finger C2H2 type domain profile. 21 48 IPR013087 -
Gma10g00043 175 MobiDBLite consensus disorder prediction 75 95 - -
Gma10g00043 175 ProSitePatterns Zinc finger C2H2 type domain signature. 23 43 IPR013087 -
Gma10g00043 175 MobiDBLite consensus disorder prediction 47 66 - -
Gma10g00043 175 MobiDBLite consensus disorder prediction 81 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00043 Gma-Chr10 411105 411632 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gma10g00043 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00043 - K09228 pvu:PHAVU_007G277300g 175.252