Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00040 ATGGGGAGGACAGGGAAATGGCTCAGGAGCTTGTTGACAGGGAAGAGATCAGACAGAGAGAAAGAGAAGGAAAAGGAAAAATGTGGCACCAACATGTGTTTGTTGAATGGCATCACAAGCACAACAGAAACAGAAAATCCAACCACACCAGTTTCAACAACAACAACCACCAAGGAGAAAAGAAGGTGGAGTTTCAGGAGATCACCAGCTTCCAGGGAACTGAATCTTGCAGAATCTGGTGCCATTGCTTCTTCAGTCACAGTGCAAAATGCTGAGAATGATCAAAGGGAGCATGATCCTGATTCCAATGGGTTGTCAACAAGATGTTCTGAAGAGGCTGCAGCTATTAAAATTCAATCGGTGTTTCGGTCCTACTTGGCAAGAAAGGCACTGTATGCTCTCAGAGGACTAGTGAAGTTGCAGGCATTGGTGAGGGGTCACTTGGTGAGAAAACAGGCCAGGGAGACACTGAGATGCATTCAGGCTTTGGTCATAGCACAAGCCAGGGCTCGTGCTCAGAGGGCGCGGATGGTGTTAGAAGATCAAAACCTATCACCCTACAGAATAACCACTGAGGAAAACTTCTTCATGCTTATGCATAATGAAATGGACAGTGGTTTGGAAGAGAATGCCAAGATTGTGGAGATGGCTGTTTGTGAATCCAAAGGCAACTCAAGAGGAAGAAACAGCGCTGCGAATCGCGAGCCTTCTGATCATAGATTTTCTGCATATTACTCATCAAACGGTTCATACTCAAAGGAGGAAAAGTACAATGCATCATCACCTGCACCATCAACACTGACAGAATTGAGTCCAAGAGCATGCAATGGTCATTTTGAGGAGTGTTCATTCAGCACAGCACAAAGCAGTCCCTATTACTACTCAGAAGAAGTGTCAAGAGTGGATAATAAAATTACAAAGGCTCCATTTGCATTCCCTAAACCAGCATACACAGAACCCATGTCCTATGACTACCCTTTGTTTCCAAACTACATGGCGAACACGGAATCGTCGAGGGCCAAAGCCAGATCACAGAGTGCACCAAAGTCAAGGCCAGATTCGAACGAGAGGCAGCCAAGCCGAAGAAGAGCTTCAGTGGAAGGAAGAAATGTCCCAAGGCCAGTGAGGATGCAAAGGTCATCTTCACATGTTGGTTTCACTGCCCAAAACTACCAATATCCATGCTCAATAAAGCTTGACAGGTCCATAGTCAGTGAGTGTGGCTCTACAAGTACAGTGATCACAAACACAAACTCTAATTACTTCACATGA 1272 0.4536 MGRTGKWLRSLLTGKRSDREKEKEKEKCGTNMCLLNGITSTTETENPTTPVSTTTTTKEKRRWSFRRSPASRELNLAESGAIASSVTVQNAENDQREHDPDSNGLSTRCSEEAAAIKIQSVFRSYLARKALYALRGLVKLQALVRGHLVRKQARETLRCIQALVIAQARARAQRARMVLEDQNLSPYRITTEENFFMLMHNEMDSGLEENAKIVEMAVCESKGNSRGRNSAANREPSDHRFSAYYSSNGSYSKEEKYNASSPAPSTLTELSPRACNGHFEECSFSTAQSSPYYYSEEVSRVDNKITKAPFAFPKPAYTEPMSYDYPLFPNYMANTESSRAKARSQSAPKSRPDSNERQPSRRRASVEGRNVPRPVRMQRSSSHVGFTAQNYQYPCSIKLDRSIVSECGSTSTVITNTNSNYFT 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00040 423 Gene3D - 110 162 - -
Gma10g00040 423 ProSiteProfiles IQ motif profile. 135 162 IPR000048 GO:0005515
Gma10g00040 423 MobiDBLite consensus disorder prediction 336 353 - -
Gma10g00040 423 MobiDBLite consensus disorder prediction 87 108 - -
Gma10g00040 423 Pfam Protein of unknown function (DUF4005) 303 368 IPR025064 -
Gma10g00040 423 PANTHER IQ-DOMAIN 5-RELATED 1 411 - -
Gma10g00040 423 MobiDBLite consensus disorder prediction 336 383 - -
Gma10g00040 423 MobiDBLite consensus disorder prediction 12 27 - -
Gma10g00040 423 MobiDBLite consensus disorder prediction 39 58 - -
Gma10g00040 423 SMART iq_5 110 132 IPR000048 GO:0005515
Gma10g00040 423 SMART iq_5 133 154 IPR000048 GO:0005515
Gma10g00040 423 MobiDBLite consensus disorder prediction 1 27 - -
Gma10g00040 423 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 411 - -
Gma10g00040 423 MobiDBLite consensus disorder prediction 39 71 - -
Gma10g00040 423 ProSiteProfiles IQ motif profile. 111 139 IPR000048 GO:0005515
Gma10g00040 423 Pfam IQ calmodulin-binding motif 113 130 IPR000048 GO:0005515
Gma10g00040 423 Pfam IQ calmodulin-binding motif 138 154 IPR000048 GO:0005515
Gma10g00040 423 MobiDBLite consensus disorder prediction 354 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00040 Gma-Chr10 390134 392006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00040 1 418 IQD Protein Family AT4G14750 44.635 2.26e-85 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00040 - - gmx:100807852 778.859