Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02591 ATGACCGGTAAAAGTCCAATTACTCAACGGACAGCGAGACATGGCTCACACAAACTGTGCAAATTTGATTTATCGGATCTAGAATGGACAAATATGATTCCAGAGTGTCCAACATACCACCCATCAGAGCATGAGTTTGAGCATCCTTTAGTTTATCTGCAGAAGATTGCTCATGAGGCTTCTAAATATGGTATATGCAAAATTGTTTCTCCAATTGCAGCCTCTAACCCAGCTGCTTTTGTCTTAATGAAAGAGAAAAAAAATTTCAAGTTTGAAACAAATGTACAGCCTCTTCGTCTTTCTAAATGGAATGAAAAGGATATAATAACCTTTTCTATGAGAGGCAGAAAATATACATATCATGATTTTGAGGTTCTTGCAAACAAGGCCTTTTTTAGTAGATTTCACAGTTCTAGAGACCTTCCCTCTTCTTATGTGGAAAAGGAATTCTGGCATGAGATGGCTCAAGGAGAAAAAGGAACAGTTGAGTACGGAGTCAATGTCGAAGGTAGTGCCTTTTCATGTGATCCTAATGACAGGCTTGGAACAAGCAAATGGAATTTGAAGAATTTTTCACAGCTTCCACAATCCCTGATACGTTTAGTTGACAGGGAAATTCCCGGAATAACTGATCCTATGCTTTACATTGGGATGCTGTTCAGTATGTTTGCGTGGCATGTTGAAGATCATTATTTGTACAGCATAAATTATCATCACTCAGGTGCAAATAAAACTTGGTATGGCGTGCCTGGCTATGCAGCATCACAATTTGAAAAGACGGTCTTACAACATGTGTATTGCAATAAGATCATAACAAAACATGGAGAGGATGGAGCTTTCAAGTTTCTAGCACAAAAAACAACCATGTTCCCACCAAATGTCATGTTACAACATGATGTGGCAGTTTACAAGGCTGTACAAAAGCCAGGAGAGTTTATCATCACCTTTCCTAGAGCATATCATGCTGGATTTAGCCATGGTTTTAACTGTGGAGAAGCAGTAAACTTTGCAAATGGAGATTGGTTTCCACTTGGGGCTGCAGCTAGCAGGCGTTATACACATCTCAAAATGATGCCTTTAATTCCATATGAGGAACTTCTTTGTAAAGAGGCAATGTTGGTTTTCAAGTCCTCAAGAGTCAGAAGTTCCAAGAACAAACCTGAAGACACAACATCTTATCAAGCTATTATGCTGCCTTTCATGCATCTTATGCAATCTTATAAGACCTCCCTCTTGCGACTGAACAGTTCAAGAAAGTTGCATAGTTCTTCAAATACAACAGGTTCTCAGATATGCAGCCTTTGCTACAGGGATTGTTATGTAGCTTATTTGTTGTGCAAGTACTGCTTTTCTCATCCAATTTGTCTTTTCCACGGTAACACATGA 1386 0.3903 MTGKSPITQRTARHGSHKLCKFDLSDLEWTNMIPECPTYHPSEHEFEHPLVYLQKIAHEASKYGICKIVSPIAASNPAAFVLMKEKKNFKFETNVQPLRLSKWNEKDIITFSMRGRKYTYHDFEVLANKAFFSRFHSSRDLPSSYVEKEFWHEMAQGEKGTVEYGVNVEGSAFSCDPNDRLGTSKWNLKNFSQLPQSLIRLVDREIPGITDPMLYIGMLFSMFAWHVEDHYLYSINYHHSGANKTWYGVPGYAASQFEKTVLQHVYCNKIITKHGEDGAFKFLAQKTTMFPPNVMLQHDVAVYKAVQKPGEFIITFPRAYHAGFSHGFNCGEAVNFANGDWFPLGAAASRRYTHLKMMPLIPYEELLCKEAMLVFKSSRVRSSKNKPEDTTSYQAIMLPFMHLMQSYKTSLLRLNSSRKLHSSSNTTGSQICSLCYRDCYVAYLLCKYCFSHPICLFHGNT 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02591 461 ProSiteProfiles JmjN domain profile. 36 77 IPR003349 -
Gma09g02591 461 PANTHER TRANSCRIPTION FACTOR JUMONJI FAMILY PROTEIN 2 458 - -
Gma09g02591 461 Pfam jmjN domain 37 69 IPR003349 -
Gma09g02591 461 SMART cupin_9 183 353 IPR003347 -
Gma09g02591 461 Gene3D Cupin 36 398 - -
Gma09g02591 461 Pfam JmjC domain, hydroxylase 213 336 IPR003347 -
Gma09g02591 461 PANTHER LYSINE-SPECIFIC DEMETHYLASE 2 458 - -
Gma09g02591 461 SUPERFAMILY Clavaminate synthase-like 185 371 - -
Gma09g02591 461 ProSiteProfiles JmjC domain profile. 183 353 IPR003347 -
Gma09g02591 461 SMART JmjN_1 35 76 IPR003349 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02591 Gma-Chr9 51240842 51243646 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g02591 33 459 JUMONJI Transcription Factor Family AT2G34880 30.677 7.29e-60 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Gma09g02591 JmjC 1.8e-38 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02591 - - gmx:100793144 962.6