Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02576 atgagttccaattccaGAGAGAGTCAAGTTCACCCAGAAATAGCAAAGGTCGAGGATCCTTACCTCTCTGCTGTGTTACTTTGCTTTAGCCGGGTCCTCCCTGCAGTCCTAAATGCAGCTATTGATCTCAATTTGTTTGATATCATAGCAAAGGCACAGAGTTCATGTGACTCAAGTTTCTCAGCCTCTGAGATTGCTTCTTTGCTTCCAAATCAACACCCACAATTGGCTAATAGGCTTGAACGCATATTACCTTTGTTGGCCAGTTATTCTCTTCTAAATTGCTCCATTCGCACAAATGAAGATGGTAAGAGAGAAAGAGTTTATGCTCTCTCACCCGTTGGTGCATACTTTGCATTTGATAAGGATGAAGGAAGTTCTTTGGCTCCTCTCTCTTCTTTAATCCATCGCGGATTTCATGACATGTGGAAGGATGTAAAGGATGCAATTGTGGACCCTAACAACAATAACCATTTTGAAAATGTGCATGGAATACCACCATATGATTATATGGAGAAAAATGCTGAGCTGAATGACATTTTTTACAAAGCAGTAATTCACGCTGCCCCACTAGAACTGAAAAGGGCACTCAAACTATACAAAGGATTTGAGGGAGTGTCAACACTTGTTGATGTAGGAGGTGGAGCTGGAGAGACCCTGAAACAGATTCTCCCAAAATATCCTTCAATGAAAGGAATTAATTTTGATTTGCCTCTGGTGATTCAAAAAGCACCACCTCACCCAGGTATAGAGCAAATTGCAGGAGATATGTTTGAAAGTGTTCCAACTGGTGATGCCATTTTAGTGAAGTTTGTATGTCACAATTGGGCTGATGAAGATTGTATAAAGTTTTTAAGAAACTTTCACAAAGCCTTGCCACAACATGGAAAAGTGATTGTTTTCGAATATATAATACCAGAAGTCCCGAATCCAAGCTATATATCTAAGCATACTTGTACTCTCGACAATGTCATGTTTTTAGCACATGGTGGAAGGGAAAGAACTCAGAAGGAATTTGAGAACTTGTGCAAGAGCTCTGGTTTTTCCAAGTTTCATGTAGCAAGTAGTGACATCTCATCTACGTTAGGAGTAATGGAATTCTATAAGTAG 1110 0.3937 MSSNSRESQVHPEIAKVEDPYLSAVLLCFSRVLPAVLNAAIDLNLFDIIAKAQSSCDSSFSASEIASLLPNQHPQLANRLERILPLLASYSLLNCSIRTNEDGKRERVYALSPVGAYFAFDKDEGSSLAPLSSLIHRGFHDMWKDVKDAIVDPNNNNHFENVHGIPPYDYMEKNAELNDIFYKAVIHAAPLELKRALKLYKGFEGVSTLVDVGGGAGETLKQILPKYPSMKGINFDLPLVIQKAPPHPGIEQIAGDMFESVPTGDAILVKFVCHNWADEDCIKFLRNFHKALPQHGKVIVFEYIIPEVPNPSYISKHTCTLDNVMFLAHGGRERTQKEFENLCKSSGFSKFHVASSDISSTLGVMEFYK 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02576 369 Pfam Dimerisation domain 36 88 IPR012967 GO:0046983
Gma09g02576 369 SUPERFAMILY "Winged helix" DNA-binding domain 17 121 IPR036390 -
Gma09g02576 369 Gene3D Vaccinia Virus protein VP39 120 369 IPR029063 -
Gma09g02576 369 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 133 355 IPR029063 -
Gma09g02576 369 CDD AdoMet_MTases 208 305 - -
Gma09g02576 369 PIRSF O-mtase 1 369 IPR016461 GO:0008168
Gma09g02576 369 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 369 - -
Gma09g02576 369 PANTHER O-METHYLTRANSFERASE 1 369 IPR016461 GO:0008168
Gma09g02576 369 Gene3D - 2 118 IPR036388 -
Gma09g02576 369 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 25 369 IPR016461 GO:0008168
Gma09g02576 369 Pfam O-methyltransferase domain 143 349 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02576 Gma-Chr9 51073503 51075422 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g02576 3 353 Monolignol Biosynthesis Gene Families AT5G54160 44.068 1.06e-97 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02576 - - gmx:106794104 736.873