Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02574 ATGTCTGGCGTGCCATTACCCTCAAACCTTCTGCCTGGTGATGGAAGCCCTGAATGGTTTAGCAGAGCAGACAATGCATGGCAGCTAATAGCTGCAACCCTAGTTGGTCTCCAAAGTGTTCCAGGGCTCATAATCTTGTACGGTGGAGCAGTGAAGAAGAAATGGGCAGTGAACTCAGCATTCATGTCACTCTATGCTTTTGCATGTGTGTTTTTCTGTTGGGTTGTGTGGGGATACAGAATGTCTTTTGGTGATGAGCTTCTTCCTTTCTGGGGAAAGCCTGCTATGTCACTTGAACATACTTACCTTTTCAAGAGGGCCTTTTTGGGGGCATTCCCAAATGCCACAATGGTGTATTTCCAGTGTGTCTTTGCTGCCATCACTTTGATTCTCATTGCTGGGGCTGTGTTGGGGCGCATGAACTTCTATGCTTGGATGTTGTTTGTGCCTTTGTGGCTCACTTTCTCATACACCTTCACAGCTTTCAGCATATGGAGTTCTAGTGGGTTTTTGACCAAAATGGGGATAATAGACTACTCAGGTGGATATGTGATCCATTTGTCTTCCGGGGTTGCAGGATTCACGGCTGCATATTGGGTTGGGCCACGGCTAAACAAGGACAGGGAAAGGTTCCCTCCAAACAACATTCTTCTGATGCTGGCAGGGGCAGGGCTGCTGTGGATGGGGTGGACGGGCTTCAACGGAGGAGATCCATACACAGTAAACTCGGATGCTTCCCTTGCCGTCCTCAACACCCATGCTTGCACTGCTACCAGCTTGCTCACTTGGGTCATCCTTGATGTCCTCTTTTTCCGAAAGCCTTCTGTCATTGGAGCTGTTCAAGGCATGATCACTGGCTTGGTTTGCATAACCCCTGCTGCAGGTGTTGTGGAGGGATGGGCAGCACTTATAATGGGAGTGTTATCTGGCTCAATTCCATGGTTCACCATGATGGTGGTCCATAAGAGATCAAAGCTACTGCAGAAGGTTGATGATACAATGGCAGTGTTCCACACTCATGCCATTGCAGGAACCCTAGGAGGACTCCTCACTGGACTCTTTGCTGATCCAAGACTTAACAAATTGTTCTATGGAACTGATGGTCAATACGTTGGTTTCTTTTATGGTTTAGGTTCGAAGAAGGTCAGTACCGGGTTCAGGCAAATGGGGGTCCAAATCCTTGGGATTATCTTTGTTATCTTTGTCAATGTTATCAGCACAAGTTTGATTTGCCTCTTCATTAGAATTTTTGTTCCGTTGAGAATGTCTGAAGAGGATATGGAGATAGGTGATGAGGCTGCTCATGGGGAAGAAGCTTATGCAATCTGGGGTCAGGGTGATAAGCTTGAAAACTCAAGTTCTAAGTATGGAAGTTCATTATATGATGATGTTGAAGCTGGTGGCCCCAAGAAGAAGCGTGGCGGCACGGTTGAGATGATGTCGAACTAA 1449 0.47 MSGVPLPSNLLPGDGSPEWFSRADNAWQLIAATLVGLQSVPGLIILYGGAVKKKWAVNSAFMSLYAFACVFFCWVVWGYRMSFGDELLPFWGKPAMSLEHTYLFKRAFLGAFPNATMVYFQCVFAAITLILIAGAVLGRMNFYAWMLFVPLWLTFSYTFTAFSIWSSSGFLTKMGIIDYSGGYVIHLSSGVAGFTAAYWVGPRLNKDRERFPPNNILLMLAGAGLLWMGWTGFNGGDPYTVNSDASLAVLNTHACTATSLLTWVILDVLFFRKPSVIGAVQGMITGLVCITPAAGVVEGWAALIMGVLSGSIPWFTMMVVHKRSKLLQKVDDTMAVFHTHAIAGTLGGLLTGLFADPRLNKLFYGTDGQYVGFFYGLGSKKVSTGFRQMGVQILGIIFVIFVNVISTSLICLFIRIFVPLRMSEEDMEIGDEAAHGEEAYAIWGQGDKLENSSSKYGSSLYDDVEAGGPKKKRGGTVEMMSN 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02574 482 Gene3D Ammonium transporter AmtB like domains 13 444 IPR029020 -
Gma09g02574 482 TIGRFAM amt: ammonium transporter 24 440 IPR001905 GO:0008519|GO:0016020|GO:0072488
Gma09g02574 482 MobiDBLite consensus disorder prediction 454 482 - -
Gma09g02574 482 PANTHER AMMONIUM TRANSPORTER 4 480 - -
Gma09g02574 482 Pfam Ammonium Transporter Family 26 440 IPR024041 GO:0008519|GO:0016020|GO:0072488
Gma09g02574 482 SUPERFAMILY Ammonium transporter 19 422 - -
Gma09g02574 482 PANTHER AMMONIUM TRANSPORTER MEP2 4 480 IPR001905 GO:0008519|GO:0016020|GO:0072488
Gma09g02574 482 PRINTS Rhesus blood group protein signature 121 137 IPR002229 GO:0005887
Gma09g02574 482 PRINTS Rhesus blood group protein signature 217 235 IPR002229 GO:0005887
Gma09g02574 482 PRINTS Rhesus blood group protein signature 248 270 IPR002229 GO:0005887
Gma09g02574 482 ProSitePatterns Ammonium transporters signature. 178 203 IPR018047 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02574 Gma-Chr9 51031501 51034222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g02574 115 474 Inorganic Solute Cotransporters AT2G38290 61.111 3.02e-145 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02574 K03320 - gmx:100787856 968.378
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01889 18 51816442 51821259 Gma09g02574 09 51031501 51034222 GST