Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02564 ATGGGAGGCTGTTGCAGCCACGATGTTTCGGTTCGAGGGAAGGTGGAGAGCGAGATGGATGATAGAGAATATGAGTATGATTATGAAAATGATGTGTCTTATCAACAAGGTGGAGCATTGGTCAGGTTAAGAGGTTCCTCTAGGTTTGCATCAATGTACTCCCAACAAGGCCAGAAAGGTGTGAACCAAGATGCAATGACAGTTTGGGAGGACTATACTGGAGAAAAAGATGTGATCTTTTGTGGTGTGTTCGATGGTCATGGTCCTCTAGGCCACAAGGTTTCACAATTTATTCGAGACAATCTACCCTCAAAACTGTCTGCAGCAATAGAAATTTCACAACAGAAGACAATCAAATACTATGATGCCAATGATGCAGAAACTGGTAGCTTTGATGATGCCTACGATGACAATAACCACAACATGTCCCTTGCTTCATGGGAGGGATGCTTGCTGAAATCCTTTGATGAGATGGATGAGTACCTTGCTCAGGAAATTAACACTGACAGCTATTGCAGTGGTTGCACAGCTGTGACATTAATTAAACAGGGTGACCAGTTGATAGTTGGCAATTTGGGTGATTCTCGTGCAGTACTTTGCACAAGGGATAGGGACCAACTCATTCCTGTTCAACTCACTGTTGACTTGAAACCGGATATTCCAAGTGAAACCTCAAGAATAGTTAACTGTGAAGGAAGAGTTTTTGCAGCAGAAGAAGAACCAGATGTGTACAGAATATGGATGCCTGATGATGACTGCCCTGGACTAGCCATGTCAAGAGCCTTTGGGGACTTTTGCCTCAAAGATTATGGCCTCATCTCAGTTCCTGATGTGTTCTACAGAAAAATTACCCCTCAAGATGAATTTGTGGTTTTAGCAACTGATGGGGTGTGGGATGTGCTCACTAACAGTGAAGTGATAAACATAGTAGCTTCAGCACCAAGGAGGTCCATTGCAGCCAAGTTGTTAGTGAAGCGTGCTGTTAGAGCCTGGAGATACAAGTATCCTGGTTCCAAGGTTGATGACTGTGCTGTCATATGCTTGTTTCTGGATGCACAATCTGCTCTATCACACTCACAATCCTACAGTAATAGAAAGAGTAGACAGCGCAGCAAGCACTTGAATCGCACTAAGTCCACTAGAAATGAAGACAATGAAACTGTGTATGGCAAGGTTGGGGTGGAGCTAGATGAAGAATGGAAGGCCCTTGGAGGGTTTGCAAGAGCCAACTCTTTATCAAAACTTCCACGCCTTGCTAGGGGTATGAGTAAACGGCAATCATCTAAATACTATATACCAAGTTGA 1305 0.4368 MGGCCSHDVSVRGKVESEMDDREYEYDYENDVSYQQGGALVRLRGSSRFASMYSQQGQKGVNQDAMTVWEDYTGEKDVIFCGVFDGHGPLGHKVSQFIRDNLPSKLSAAIEISQQKTIKYYDANDAETGSFDDAYDDNNHNMSLASWEGCLLKSFDEMDEYLAQEINTDSYCSGCTAVTLIKQGDQLIVGNLGDSRAVLCTRDRDQLIPVQLTVDLKPDIPSETSRIVNCEGRVFAAEEEPDVYRIWMPDDDCPGLAMSRAFGDFCLKDYGLISVPDVFYRKITPQDEFVVLATDGVWDVLTNSEVINIVASAPRRSIAAKLLVKRAVRAWRYKYPGSKVDDCAVICLFLDAQSALSHSQSYSNRKSRQRSKHLNRTKSTRNEDNETVYGKVGVELDEEWKALGGFARANSLSKLPRLARGMSKRQSSKYYIPS 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02564 434 PANTHER PROTEIN PHOSPHATASE 2C 65-RELATED 1 410 - -
Gma09g02564 434 Gene3D - 44 352 IPR036457 -
Gma09g02564 434 ProSiteProfiles PPM-type phosphatase domain profile. 49 350 IPR001932 -
Gma09g02564 434 PANTHER ALPHABET, ISOFORM E-RELATED 1 410 - -
Gma09g02564 434 CDD PP2Cc 48 350 IPR001932 -
Gma09g02564 434 Pfam Protein phosphatase 2C 73 327 IPR001932 -
Gma09g02564 434 SUPERFAMILY PP2C-like 47 351 IPR036457 -
Gma09g02564 434 SMART PP2C_4 38 348 IPR001932 -
Gma09g02564 434 MobiDBLite consensus disorder prediction 360 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02564 Gma-Chr9 50915322 50919238 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g02564 1 390 PP2C-type Phosphatase Gene Family AT5G01700 50.000 6.72e-134 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02564 - - gmx:100783603 879.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01920 18 52267937 52273809 Gma09g02564 09 50915322 50919238 GST
Gma09g02564 09 50915322 50919238 Gma01g01308 01 46096277 46098768 PCT
Gma01g01308 01 46096277 46098768 Gma09g02564 09 50915322 50919238 PCT