Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02558 ATGACCATGGGAGATCATAATAACTGGGGAACTTCTGAACTTAGTCTTAATAATCAATATCAAAATCATAATCAAGTTGGACTTGATGTTCCTAAATTCAAGTCTGTTCAACCTCCCTCACTACTCTTCTCTCCCTCATCAATCTCCCCTTCTTCTTACTTCAACTTTTCATCTGCTTTCAGCCCTTCTGAGTTCTTGAACTCACCTTTGTTTTTTCCTTCTCCAAATATTTTTGCTTCTCCTACTACTGAGGCTTTGGTTGGCCAGAGCTTCAACTGGAGGAACGGTTCGGGCGAAGAACAACAGCGTGGCAAGGAGGATGAGAAAAACTACTCCGACTTCTCTTTCCAAACCCAAATTCAATCTTCCTCAAACATGTTTCAAGTGGAACCGCTTAAGAAACAAGACATGTGGAAATTCAATGAACCTACAAAACAAACTGATTTTTCACCTGAGCGGACAGCAACAAAATCTGAATTCCCTTCAATTCAGAGCTTTTCCTCAGAGATGGCAGAAGGAAAACCAGAAATACAAAGTAGCTCAGTTCCCGGGTCTGGTTATTTTGACTACACAAGTGCATCTCAGTCTGTAAGAGAACAAAAGAGAACAGAAGATGGGTTCAACTGGATAAAATATGGACAGAAACAAGTGAAAGGGAGTGAAAATCCTCGTAGTTATTACAAGTGCACACATCCAAATTGCTCAGTGAAGAAGAAAGTGGAGAAGTCTTTGGATGGACATATCACTGAAATAGTATATAAGGGCCAACATAGCCACCCAAAACCGCAGTCTACTAGAAGAACAAACTCTCAATCAATTCATCAACCTTCTTCGTCTTGCACAAACTCAGGGATAACTGATCATTCAGTGGTGACTCTAGGAAATCCACAAATGGATCATTTCTCCATACAAGAAGATTCTTCAGCTTCTGTTGGAGAGGAAGAGTTTGAGCAAACACCGCAAACCAGTTATTCCGGAGGAGACGGAGATAATCTTGGACCTGATGCCAAAAGATGGAAGGGAGATAACGAAAACGATGGCTATTCAGTCTCAGCAAGCAGATCTGTTAGAGAGCCTAGAGTTGTTGTTGAAACCACAAGCGAAATTGATATACTTGATGATGGCTTTAGGTGGAGGAAATATGGACAGAAAGTAGTCAAAGGAAACTCAAATGCAAGGAGCTATTACAAATGCACCGCCCCTGGTTGTTCAGTGAGAAAACACGTTGAGCGAGCCGCACATGACATCAAAGCTGTGATCACAACTTATGAAGGGAAGCACAACCATGATGTGCCTGCTGCACGTGGTAGCGGAAAATATAACTCGAACAGAAATTCTCAGAACAGCAACATATCAGCGCCTATAAGACCCTCGGCAGTGAATTGTTATTCTAACTCATCAAGTTTCACAAATTCTCTCTATAATAATACTAGGCTTCCAGCAACTGGAAATCAAGAATCATTTTCACTGGACAAGTTCAAGAATCCTGGAAGTTTTGGCTATTCAGATCTTAACAGACCAATGGGTTCACATACCAATCATGCACAATACACAGATGCTGCATACTCAAGGGCCAAGGATGAGAGGAAGGATGATTCATTCCTTCAGTCATTTCTCTCAAAGGACTTCTAA 1632 0.413 MTMGDHNNWGTSELSLNNQYQNHNQVGLDVPKFKSVQPPSLLFSPSSISPSSYFNFSSAFSPSEFLNSPLFFPSPNIFASPTTEALVGQSFNWRNGSGEEQQRGKEDEKNYSDFSFQTQIQSSSNMFQVEPLKKQDMWKFNEPTKQTDFSPERTATKSEFPSIQSFSSEMAEGKPEIQSSSVPGSGYFDYTSASQSVREQKRTEDGFNWIKYGQKQVKGSENPRSYYKCTHPNCSVKKKVEKSLDGHITEIVYKGQHSHPKPQSTRRTNSQSIHQPSSSCTNSGITDHSVVTLGNPQMDHFSIQEDSSASVGEEEFEQTPQTSYSGGDGDNLGPDAKRWKGDNENDGYSVSASRSVREPRVVVETTSEIDILDDGFRWRKYGQKVVKGNSNARSYYKCTAPGCSVRKHVERAAHDIKAVITTYEGKHNHDVPAARGSGKYNSNRNSQNSNISAPIRPSAVNCYSNSSSFTNSLYNNTRLPATGNQESFSLDKFKNPGSFGYSDLNRPMGSHTNHAQYTDAAYSRAKDERKDDSFLQSFLSKDF 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02558 543 MobiDBLite consensus disorder prediction 427 456 - -
Gma09g02558 543 ProSiteProfiles WRKY domain profile. 198 262 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma09g02558 543 Pfam WRKY DNA -binding domain 204 260 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma09g02558 543 Pfam WRKY DNA -binding domain 373 429 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma09g02558 543 SMART WRKY_cls 372 431 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma09g02558 543 SMART WRKY_cls 203 261 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma09g02558 543 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 307 541 - -
Gma09g02558 543 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 19 290 - -
Gma09g02558 543 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 19 290 IPR044810 GO:0003700
Gma09g02558 543 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 307 541 IPR044810 GO:0003700
Gma09g02558 543 MobiDBLite consensus disorder prediction 258 328 - -
Gma09g02558 543 MobiDBLite consensus disorder prediction 253 352 - -
Gma09g02558 543 ProSiteProfiles WRKY domain profile. 367 432 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma09g02558 543 MobiDBLite consensus disorder prediction 438 456 - -
Gma09g02558 543 SUPERFAMILY WRKY DNA-binding domain 199 262 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma09g02558 543 Gene3D WRKY domain 189 263 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma09g02558 543 Gene3D WRKY domain 357 433 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma09g02558 543 SUPERFAMILY WRKY DNA-binding domain 365 432 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02558 Gma-Chr9 50881369 50883871 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g02558 198 539 WRKY Transcription Factor Family AT2G38470 53.352 1.04e-106 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma09g02558 WRKY 3e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02558 K13424 - gmx:100776837 1058.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01927 18 52325322 52329068 Gma09g02558 09 50881369 50883871 GST
Gma09g02558 09 50881369 50883871 Gma01g01313 01 46176962 46179947 PCT
Gma01g01313 01 46176962 46179947 Gma09g02558 09 50881369 50883871 PCT