Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02519 ATGATGTCTCGCGTCCACCATGACAATCTTGTTAAGTTTATTGGAGCATGTAAGGATCCTCTTATGGTAATAGTTACAGAGCTATTACCAGGGATGTCACTGCGTAAATATTTAACGAGTATCCGTCCTAAACTATTAGACCTTGATGTGGCTATAAACTTTGCCCTTGATATTGCTCGAGCCATGGATTGGCTACATGCCAATGGGATCATACACAGAGATCTGAAACCTGACAATCTATTGCTTACGGCGGACCAGAAGTCTGTTAAACTTGCAGATTTTGGTCTTGCAAGAGAAGAAACTGTGActgaaatgatgactgcagaaacaggaacttaccgttggatggcaccagagTTGTACAGTACTGTGACATTGCGTCAGGGAGAGAAAAAGCACTACAACAACAAGGTTGATGTATATAGCTTTGGAATTGTTTTATGGGAGCTACTAACAAACCGCATGCCCTTTGAAGGGATGTCCAATTTACAGGCTGCTTATGCTGCTGCATTTAAGCAAGAGAGGCCCGGCATTCCAGATGATATATCCCCTGAACTTGCTTTTGTCATACAATCTTGCTGGGTTGAAGATCCTAACTTGAGACCAAGCTTTAGTCAGATCATCCGCATGCTCAACGCGTTTCTCTTCACACTCTCACCACCGTCTCCTCCTTTGCCAGTACCACCTGACAATGAACCTGAGGTGGCTACAACAAGTAATGGCACCATTACTGAGTTTTCTGCCCGAAACAGAGGAAAGTTTGGCTTTCTTCGCCAATTGTTTTCTTCGAAGAGGACCAAAAACTAA 807 0.4052 MMSRVHHDNLVKFIGACKDPLMVIVTELLPGMSLRKYLTSIRPKLLDLDVAINFALDIARAMDWLHANGIIHRDLKPDNLLLTADQKSVKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPGIPDDISPELAFVIQSCWVEDPNLRPSFSQIIRMLNAFLFTLSPPSPPLPVPPDNEPEVATTSNGTITEFSARNRGKFGFLRQLFSSKRTKN 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02519 268 ProSiteProfiles Protein kinase domain profile. 1 215 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g02519 268 PRINTS Tyrosine kinase catalytic domain signature 26 39 IPR001245 GO:0004672|GO:0006468
Gma09g02519 268 PRINTS Tyrosine kinase catalytic domain signature 64 82 IPR001245 GO:0004672|GO:0006468
Gma09g02519 268 PRINTS Tyrosine kinase catalytic domain signature 138 160 IPR001245 GO:0004672|GO:0006468
Gma09g02519 268 PRINTS Tyrosine kinase catalytic domain signature 182 204 IPR001245 GO:0004672|GO:0006468
Gma09g02519 268 ProSitePatterns Serine/Threonine protein kinases active-site signature. 70 82 IPR008271 GO:0004672|GO:0006468
Gma09g02519 268 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 1 240 - -
Gma09g02519 268 PANTHER SERINE-THREONINE PROTEIN KINASE 1 240 - -
Gma09g02519 268 SUPERFAMILY Protein kinase-like (PK-like) 1 237 IPR011009 -
Gma09g02519 268 Gene3D Transferase(Phosphotransferase) domain 1 1 219 - -
Gma09g02519 268 Pfam Protein tyrosine and serine/threonine kinase 1 211 IPR001245 GO:0004672|GO:0006468
Gma09g02519 268 CDD STKc_MAP3K-like 1 211 - -
Gma09g02519 268 SMART serkin_6 1 215 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02519 Gma-Chr9 50460093 50464057 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g02519 1 268 MAP Kinase Kinase Kinase AT5G01850 73.288 7.47e-147 413
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Gma09g02519 PK_Tyr_Ser-Thr 1.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02519 - - gmx:100809251 520.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g02519 09 50460093 50464057 Gma01g01355 01 47198860 47204363 PCT
Gma01g01355 01 47198860 47204363 Gma09g02519 09 50460093 50464057 PCT