Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02514 ATGCTACAACGGCGGCTTCTGGAGACGGAGCTGAGCATGCCACCGTCGTACGGCGGCAGCGGCGGAAACAACACGCGCGACACGTTCATCAGCGACGCGAACTTCGACACAAACATGGTGATCATTCTGGCGGCGCTGCTGTGCGCTTTGATATGCGCGCTGGGCCTGAACTCCATCGCGCGGTGCGCGCTGAGGTGCGGGCGGCGCTTCGGCGACGAGACGGCGGAGCAGGCGGCTGCAAGGCTGGCGGGGACCGGGCTGAAGCGCCGCGAGCTCAGCCGCATCCCGGTGGCGGTGTACGGCGCCGCCGGAGGCGAAAACACTATTCCGGCGACGGAGTGCCCCATATGCCTCGGCGAGTTCGAGAAAGGGGACAAGGTTCGAATGTTGCCTAAATGCAACCACGGTTTCCACGTGAGGTGCATTGACACGTGGCTCTTGTCGCATTCCTCGTGCCCCAATTGCCGCCACTCGCTCCTAGAGAAAACCTCCGCCGCGCCGGAAAGTGGGTCGGGGCGGCGGAGCGAGGTGGTTGTTGTGGTGGAGCAGGCGAGTTGA 558 0.6452 MLQRRLLETELSMPPSYGGSGGNNTRDTFISDANFDTNMVIILAALLCALICALGLNSIARCALRCGRRFGDETAEQAAARLAGTGLKRRELSRIPVAVYGAAGGENTIPATECPICLGEFEKGDKVRMLPKCNHGFHVRCIDTWLLSHSSCPNCRHSLLEKTSAAPESGSGRRSEVVVVVEQAS 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02514 185 SUPERFAMILY RING/U-box 108 165 - -
Gma09g02514 185 SMART ring_2 114 155 IPR001841 -
Gma09g02514 185 CDD RING-H2_EL5_like 113 156 - -
Gma09g02514 185 PANTHER RING-H2 FINGER PROTEIN ATL74 1 169 - -
Gma09g02514 185 Pfam Ring finger domain 113 156 IPR001841 -
Gma09g02514 185 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 1 169 - -
Gma09g02514 185 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 87 165 IPR013083 -
Gma09g02514 185 ProSiteProfiles Zinc finger RING-type profile. 114 156 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02514 Gma-Chr9 50426999 50428498 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g02514 4 181 C3H Transcription Factor Family AT3G10910 53.763 4.02e-57 176