Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02507 ATGATGCAATTCAGCATGTGTGTGTTGTTTCTGATCCTCCTTGCACCGGTTATGTTGGTGTTTTCTGTGGACACTGGTTTCAATGATGATGTGTTGGGGTTGATTGTGTTCAAGGCTGGCTTGGATGACCCCAAAAGGAAACTCTCTTCTTGGAATGAGGATGATAACAGCCCTTGCAACTGGGAAGGTGTGAAGTGTGATCCTTCATCAAATAGGGTCACAGCTCTTGTCCTTGATGGTTTCTCTCTTTCTGGGCATGTTGATAGGGGCTTGTTGAGGTTGCAATCCCTTCAAATTCTCTCACTTTCAAGGAACAACTTCACTGGGTCAATAAACCCTGATCTTCCTCTCCTTGGGAGTTTGCAAGTTGTGGACTTGAGTGACAACAACCTCTCTGGGGAGATCCCAGAAGGGTTTTTCCAACAATGTGGCTCTCTAAGAACAGTTTCATTTGCCAAGAACAACCTCACAGGAAAGATTCCTGAGTCCTTGAGCTCATGCTCCAATTTGGCAAGTGTTAACTTCTCCTCTAATCAGCTCCATGGGGAATTGCCTAATGGAGTGTGGTTCTTGAGGGGGCTGCAGTCGCTTGATCTGTCAGATAACTTTCTTGAGGGAGAGATTCCTGAAGGGATTCAGAATCTGTATGATATGAGGGAGTTGAGTCTTCAGAGGAACAGGTTCAGTGGAAGGCTTCCTGGGGACATTGGAGGCTGCATACTTCTGAAATCACTTGACTTGAGTGGTAACTTTCTCTCAGAACTCCCTCAGTCAATGCAAAGACTCACTTCATGCACATCAATTAGTCTGCAGGGAAATTCATTCACAGGAGGCATTCCCGAATGGATTGGAGAATTGAAGAATCTAGAGGTGTTGGATCTTTCTGCCAATGGATTCTCTGGTTGGATTCCAAAGTCATTAGGGAATCTTGACTCTTTGCATAGATTGAATTTGTCTAGGAATCGGTTGACAGGAAACATGCCTGATTCTATGATGAACTGCACCAAGCTTTTGGCTCTTGACATAAGCCACAATCACTTGGCAGGCCATGTTCCTTCATGGATTTTTAAGATGGGTGTGCAAAGTATCTCTCTTTCTGGGGATGGCTTCAGCAAGGGCAATTATCCTTCACTGAAGCCCACACCTGCATCTTATCATGGTCTTGAGGTTTTGGATTTGTCATCCAATGCATTTTCTGGTGTGCTTCCATCTGGCATTGGGGGACTTGGTAGCCTCCAAGTCTTGAATTTTTCCACCAACAATATCTCTGGTTCTATTCCTGTGGGTATAGGAGACCTCAAGTCTTTGTACATTGTTGACCTGAGTGACAACAAGCTTAATGGAAGCATTCCTTCTGAAATAGAAGGGGCAACTTCACTCAGTGAGCTAAGACTGCAAAAGAACTTCCTTGGTGGGAGAATTCCAGCCCAAATTGACAAGTGTTCATCTCTAACATTTTTGATTCTTTCTCACAACAAGCTTACTGGTTCAATCCCTGCAGCCATTGCAAACCTCACCAATCTTCAGTATGTAGATTTGTCATGGAATGAACTCTCTGGAAGTTTACCCAAGGAGTTAACAAATCTTTCCCATCTTTTCTCATTTAATGTATCCTACAACCACCTTGAAGGTGAACTACCTGTGGGAGGCTTCTTCAACACCATCTCCTTCTCATCCGTCTCCGGTAACCCATTGTTGTGTGGTTCCGTTGTCAACCACTCCTGTCCTTCTGTTCATCCCAAACCTATTGTTCTAAACCCCAACTCTTCTGGTTCCAACTCCAGCATTTCCTTGCAGAACCATCGGCATAAGATCATACTAAGTATCTCTGCTCTTATTGCTATTGGAGCAGCTGCTTTTATTGCCGTTGGTGTTGTGGCTGTTACTGTCCTAAATATCCATGTGCGTTCCTCAATGGAACATACAGCTGCTCCATTTTCATTTTCTGGTGGTGAGGACTACAGTGGTTCGCCGGCAAATGATCCAAACTATGGCAAGCTTGTCATGTTTTCTGGTGATGCAGACTTTGCTGATGGAGCACATAATATTCTCAATAAAGAAAGTGAAATAGGCCGTGGGGGATTTGGAGTTGTGTATCGCACTTTCCTTCGTGACGGGCGTGCTGTTGCAATCAAGAAGCTCACAGTCTCCAGTTTGATCAAGTCCCAAGAAGAGTTTGAGAGAGAAATTAAAAAGCTTGGGAAAGTGAGGCACCCGAATCTCGTGGCACTTGAAGGTTATTATTGGACTTCATCCTTGCAGCTCCTTATCTATGATTACCTTTCCAGTGGGAGTTTGCATAAACTTCTACATGATGATAACAGCAAAAATGTATTCTCATGGCCACAAAGGTTCAAGGTTATTCTTGGCATGGCAAAAGGGTTGGCTCATTTGCACCAAATGAACATAATCCACTACAATCTCAAATCAACCAATGTGCTGATTGATTGTTCTGGCGAGCCGAAGGTCGGAGACTTTGGCTTGGTGAAACTCTTGCCGATGCTAGACCATTGTGTTTTGAGCAGCAAAATCCAAAGTGCGCTCGGATACATGGCACCCGAGTTTGCTTGCCGCACAGTCAAGATAACCAAGAAATGCGACGTGTATGGTTTTGGGATCCTGGTGCTGGAGATCGTGACAGGAAAAAGACCTGTGGAGTACATGGAGGATGATGTGGTGGTTCTTTGTGACATGGTGAGGGGTGCATTGGAAGAAGGCAAGGTGGAGCAATGTGTTGATGGGAGGCTCCTTGGTAACTTTGCTGCAGAGGAAGCAATTCCTGTGATAAAATTGGGGTTGATTTGTGCATCGCAAGTGCCATCAAATCGTCCAGACATGGCTGAGAAAGTTTGGTGCTATTTTATGCTTTGCTCATGCTGGGACAAGTTGTGA 2892 0.4464 MMQFSMCVLFLILLAPVMLVFSVDTGFNDDVLGLIVFKAGLDDPKRKLSSWNEDDNSPCNWEGVKCDPSSNRVTALVLDGFSLSGHVDRGLLRLQSLQILSLSRNNFTGSINPDLPLLGSLQVVDLSDNNLSGEIPEGFFQQCGSLRTVSFAKNNLTGKIPESLSSCSNLASVNFSSNQLHGELPNGVWFLRGLQSLDLSDNFLEGEIPEGIQNLYDMRELSLQRNRFSGRLPGDIGGCILLKSLDLSGNFLSELPQSMQRLTSCTSISLQGNSFTGGIPEWIGELKNLEVLDLSANGFSGWIPKSLGNLDSLHRLNLSRNRLTGNMPDSMMNCTKLLALDISHNHLAGHVPSWIFKMGVQSISLSGDGFSKGNYPSLKPTPASYHGLEVLDLSSNAFSGVLPSGIGGLGSLQVLNFSTNNISGSIPVGIGDLKSLYIVDLSDNKLNGSIPSEIEGATSLSELRLQKNFLGGRIPAQIDKCSSLTFLILSHNKLTGSIPAAIANLTNLQYVDLSWNELSGSLPKELTNLSHLFSFNVSYNHLEGELPVGGFFNTISFSSVSGNPLLCGSVVNHSCPSVHPKPIVLNPNSSGSNSSISLQNHRHKIILSISALIAIGAAAFIAVGVVAVTVLNIHVRSSMEHTAAPFSFSGGEDYSGSPANDPNYGKLVMFSGDADFADGAHNILNKESEIGRGGFGVVYRTFLRDGRAVAIKKLTVSSLIKSQEEFEREIKKLGKVRHPNLVALEGYYWTSSLQLLIYDYLSSGSLHKLLHDDNSKNVFSWPQRFKVILGMAKGLAHLHQMNIIHYNLKSTNVLIDCSGEPKVGDFGLVKLLPMLDHCVLSSKIQSALGYMAPEFACRTVKITKKCDVYGFGILVLEIVTGKRPVEYMEDDVVVLCDMVRGALEEGKVEQCVDGRLLGNFAAEEAIPVIKLGLICASQVPSNRPDMAEKVWCYFMLCSCWDKL 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02507 963 ProSiteProfiles Protein kinase domain profile. 684 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g02507 963 SMART LRR_sd22_2 191 214 - -
Gma09g02507 963 SMART LRR_sd22_2 286 312 - -
Gma09g02507 963 SMART LRR_sd22_2 433 456 - -
Gma09g02507 963 SMART LRR_sd22_2 505 531 - -
Gma09g02507 963 SUPERFAMILY L domain-like 46 366 - -
Gma09g02507 963 Gene3D Phosphorylase Kinase; domain 1 673 760 - -
Gma09g02507 963 Gene3D Transferase(Phosphotransferase) domain 1 761 955 - -
Gma09g02507 963 SUPERFAMILY RNI-like 255 555 - -
Gma09g02507 963 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 6 951 - -
Gma09g02507 963 Pfam Protein kinase domain 685 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g02507 963 PANTHER LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN 6 951 - -
Gma09g02507 963 ProSitePatterns Protein kinases ATP-binding region signature. 690 713 IPR017441 GO:0005524
Gma09g02507 963 Pfam Leucine rich repeat 483 542 IPR001611 GO:0005515
Gma09g02507 963 Pfam Leucine rich repeat 120 180 IPR001611 GO:0005515
Gma09g02507 963 Pfam Leucine rich repeat 387 446 IPR001611 GO:0005515
Gma09g02507 963 Pfam Leucine rich repeat 288 347 IPR001611 GO:0005515
Gma09g02507 963 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Gma09g02507 963 CDD STKc_IRAK 690 948 - -
Gma09g02507 963 Pfam Leucine Rich Repeat 194 215 IPR001611 GO:0005515
Gma09g02507 963 Gene3D Ribonuclease Inhibitor 287 359 IPR032675 -
Gma09g02507 963 Gene3D Ribonuclease Inhibitor 361 581 IPR032675 -
Gma09g02507 963 SMART LRR_typ_2 191 214 IPR003591 -
Gma09g02507 963 SMART LRR_typ_2 409 433 IPR003591 -
Gma09g02507 963 SMART LRR_typ_2 242 262 IPR003591 -
Gma09g02507 963 SMART LRR_typ_2 118 142 IPR003591 -
Gma09g02507 963 SMART LRR_typ_2 286 309 IPR003591 -
Gma09g02507 963 SMART LRR_typ_2 310 334 IPR003591 -
Gma09g02507 963 SMART LRR_typ_2 529 553 IPR003591 -
Gma09g02507 963 SMART LRR_typ_2 385 408 IPR003591 -
Gma09g02507 963 SMART LRR_typ_2 215 239 IPR003591 -
Gma09g02507 963 SMART LRR_typ_2 505 528 IPR003591 -
Gma09g02507 963 Gene3D Ribonuclease Inhibitor 187 281 IPR032675 -
Gma09g02507 963 Gene3D Ribonuclease Inhibitor 28 186 IPR032675 -
Gma09g02507 963 SUPERFAMILY Protein kinase-like (PK-like) 686 956 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02507 Gma-Chr9 50378701 50382202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g02507 1 950 Receptor kinase-like Gene Family AT5G01890 62.004 0.0 1116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Gma09g02507 Pkinase 9.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02507 - - gmx:100813535 1822.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g02507 09 50378701 50382202 Gma01g01368 01 47506782 47509864 PCT
Gma01g01368 01 47506782 47509864 Gma09g02507 09 50378701 50382202 PCT