Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02502 ATGGAAAATCTTGGTGGTTCTAGTCGTAGGAAAGCAATTGAGGAGCTTCTTAGAGGGCGTGATTCTGCCCAACAACTTAAGAGTGTCATCAATGGGACTTATGATGATGGATCAGCCACCCCATTTGCTCAACAACTTGTGAAAGAGGTGCTCATGTCCTTCACAAACTCCCTCTTGTTCTTGCACAACAACCCCACTTCTGAATCACATCATGTCTTCAATGTTCAAGTATGGGACTCTCCCAAGTCTGAGGACTCTCAAGAGAGCAATTGCAAAAGCTCCACCATTAAGGAACCAAGAGGGTGCTACAAGAGAAGAAGAACTGAACAAACATGGGAGAAGGAATCTGAAGCTCCAATTGATGACGGCCATCACTGGAGAAAGTATGGCCAAAAGGAGATCCTGAATGCCAAATTCCCTAGGAACTACTATAGGTGCACTCACAAATTTGACCAAGGTTGCCAAGCAACAAAACAGGTGCAAAGAGTTCAAGAGGAACCAATCCTATTCAAAACCACCTACTATGGGCACCATACTTGCAAGAACTCGGCAAACCCTGATATCATACTTGACCCCATGTCCCCTTCATCCTCTTCCAAGTTCCTTAGCTTTGACAACTCCTTTTCAACCCCATCCAAGCAAGAGTGCCCCTTTCTCTCATCTTCCAATAATTTCCCATCATCATCATCAGTGAAAAGGGAGTGCAAGGAGGAGGTCCCTCCCTCAATTTCCTCCAATGATTACCTCATCTCTTCTGACCTCACTTTTGATAGCTCACCAAGGCATCATGTCACTCTATCATCAACACTTGACTCTGAGTACAAGAGTGTGGACATTTCGGATGTCTTGTATGATTCTGCCCAGCTTGATTTTGTCTTTGAACCCTTCCTTGAAATTAGATGA 903 0.4441 MENLGGSSRRKAIEELLRGRDSAQQLKSVINGTYDDGSATPFAQQLVKEVLMSFTNSLLFLHNNPTSESHHVFNVQVWDSPKSEDSQESNCKSSTIKEPRGCYKRRRTEQTWEKESEAPIDDGHHWRKYGQKEILNAKFPRNYYRCTHKFDQGCQATKQVQRVQEEPILFKTTYYGHHTCKNSANPDIILDPMSPSSSSKFLSFDNSFSTPSKQECPFLSSSNNFPSSSSVKRECKEEVPPSISSNDYLISSDLTFDSSPRHHVTLSSTLDSEYKSVDISDVLYDSAQLDFVFEPFLEIR 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02502 300 SUPERFAMILY WRKY DNA-binding domain 118 181 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma09g02502 300 Gene3D WRKY domain 97 183 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma09g02502 300 Pfam WRKY DNA -binding domain 121 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma09g02502 300 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 10 291 - -
Gma09g02502 300 SMART WRKY_cls 120 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma09g02502 300 ProSiteProfiles WRKY domain profile. 115 178 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma09g02502 300 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 10 291 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02502 Gma-Chr9 50337330 50339385 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g02502 7 184 WRKY Transcription Factor Family AT3G56400 41.081 3.83e-39 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma09g02502 WRKY 6.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02502 - - gmx:100805895 596.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g02502 09 50337330 50339385 Gma03g00025 03 315352 316907 PCT
Gma03g00025 03 315352 316907 Gma09g02502 09 50337330 50339385 PCT