Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02501 ATGAGTTCTAATGAGTCCTTGCTTTTGGAATCATCGGATTCTCGTCCAGTGATTCATCACCGCCGCGGGAAATCGGGTTCCCGGAGCTACCTCTCCCTCCATGGTTCCTTCTCTTCTTCCGCCTTTGATGATGCTTTCGCTGAGAGCATCGTTTTGGATGTGAAGGAACGAGACGGTGGGGACGTTGTGTTGTCTAGAGATTGTAGTCTCTACACTGCAGCGTTTGGGAATAATATTAGCGGTTCTGAGGCTCAGTCCCCGTGGCAGTTTCCCTTGGAATGCCCCCAGCCCGAGACGAAGAGCCCGGTATCTTGGGGTGCAATGGAACTGCCTGATGCCGCCAATAGCCGTAGCGTGCCATTCGAGATATCCGGAGCTTCATCTCAGGTGCAGGACAGCAGGTTGAATGGTAAATCACAGAGAATTCGGCACAAAAGTTTGCAATTTGATGATGCTGCCTTACATGAGGACAGTGCCAGGCTGATTTATATCAATGATCCGAGGAGGACGAATGATAAGTATGAGTTCACCGGGAATGAGATCCGGACTAGCAGATACACCTTTGTTACCTTTTTGCCCAAGAATCTCTTCATTCAGTTTCATCGGGTGGCTTATCTGTATTTCCTTGCTATTGCTGCGCTCAATCAGCTTCCGCCACTGGCTGTGTTTGGGAGGACTGTGTCACTTTTCCCGCTTTTGTTTGTTCTTTGTGTCACGGCTATTAAGGATGGCTATGAGGATTGGCGGAGGCACAGGTCAGATCGCAATGAGAACAACCGGGAGTCTCTGGTGCTTCAGTCCGGTGATTTCCGATCAAAGAAATGGAAGAAAATACAAGCTGGTGAGGTTGTTAAGATCTTTGCCGATGAGACAATTCCAGCTGACATGGTCTTGTTGGGGACGAGTGATCAAAGTGGGCTTGCCTATATTCAGACAATGAATTTGGATGGAGAATCAAATTTGAAGACAAGGTATGCTAGGCAGGAAACAGCTTCAGCGGTTGCATCAGAAGCTTGTGATGTTTTTGGTGTAATTAGATGTGAGCAACCGAACCGGAATATTTATGAGTTCACGGCCAACATGGAGTTCAATGGGCTAAAGTTTTCCCTTAGCCAGTCAAACATTGTTCTGCGTGGTTGCCAATTGAAGAACACAGATTGGATAATTGGTGTTGTAGTCTATGCAGGACAGGAAACAAAAGCAATGTTGAACAGTGCAGCTTCTCCTTCCAAGAGAAGCAGACTGGAAACTTACATGAACAGAGAAACCCTTTGGTTGTCAATTTTTCTTTTTATCATGTGTTTGGTTGTGGCCATTGGGATGTGTCTTTGGTTGGTACGCCACAAGAACCAGCTTGATACCTTGCCTTACTACAGAAAAAGATACTTCACCAATGGACCGGATAATGGAAAGAAATATAAGTATTATGGGATACCAATGGAAGCATTTTTTTCCTTTTTGAGTTCTGTTATAGTGTTTCAGATAATGATACCAATATCTCTTTACATCACAATGGAGTTAGTTCGATTGGGTCAGTCATACTTCATGATTGAAGACAGGGATATGTATGATGCCTGCTCTGGGTCAAGGTTTCAGTGTAGATCATTAAATATAAATGAAGATTTGGGTCAAATACGCTATGTATTTTCAGACAAGACAGGAACACTAACAGAAAACAAAATGGAATTCCAGAGGGCTAGTGTACATGGGAAGAATTACGGGAGCTCCTTGCCTATGGTTGATAATACAGCAGCAGCAGCAGATGTTATTCCTAAACGGAGTTGGAAGCTCAAATCTGCAATTGCAGTTGATTCTGAACTGATGACAATGTTGCAGAAAGACTCAAATAGAGAAGAAAAAATTGCTGCTCATGAGTTTTTTCTTACATTGGCTGCTTGTAACACTGTAATCCCTATACTTGGTGATGATGAATTTTCTAGTATTGGAACTAATGAAGTAAATGAAGATATTAGACGCATTGATTACCAGGGAGAATCTCCTGATGAACAAGCTCTAGTTTCTGCGGCCTCTGCATATGGATATACTCTTTTTGAACGCACATCTGGACATATTGTTATTGATGTCAACGGTGAGAAACTCAGATTGGATGTATTGGGTCTGCATGAGTTTGATAGTGTGCGAAAAAGAATGTCTGTTGTTATTCGGTTTCCTGACAACGCGGTAAAGGTGTTAGTCAAAGGTGCTGATACTTCAATGTTTAGCATTTTGGAAAATGGCAGTGAGAGTAACAATAACATATGGCATGCAACTCAGAGCCATTTGAATGAATATTCTTCACAAGGTTTGCGCACTCTTGTAGTAGCCTCCAGGGATCTTTCTGGTGCTGAACATGAGGAGTGGCAAAGCAGGTATGAAGAGGCAAGCACTTCGTTGACTGACAGAGCTACTAAACTACGGCAAACAGCAGCTCTTATAGAAAGCAATTTAAAGTTACTTGGAGCAACTGGAATTGAGGACAAGCTACAAGAGGGTGTACCAGAAGCAATTGAGGCTCTACGGCAAGCTGGAATCAAGGTCTGGGTTCTTACTGGTGATAAGCAAGAGACGGCAATTTCAATTGGTCTTTCCTGCAAACTTCTTAGTGGAGACATGCAGCAGATTATTATAAATGGCACTTCAGAGGTTGAATGTAGAAATCTTTTGGCTGATGCTAAAGCCAAATATGGTGTGAAATCATCAAGTGGAGGGTGTCGGAATCAAAAGCACAAAACCAATGCTGGACATGGTGATCTTGATATTCCCAATGGTTCAAAGTCTTTGAGCTTTCCCAAATGTAATCCTGGAAACGAAGAAGGAACTGATGCTCCATTGGCACTCATAATTGATGGAAACAGTTTGGTTTATATTTTGGAGAAGGAACTGGAGTCAGAGCTTTTCGACCTTGCAACTTCCTGTAGGGTTGTGCTGTGTTGTCGAGTTGCACCCTTGCAAAAGGCAGGAATTGTTGATTTGATAAAGAGCCGCACAGATGATATGACACTGGCCATAGGTGATGGGGCCAATGATGTGTCAATGATCCAAATGGCAGATGTTGGTGTAGGAATATGTGGGCAGGAAGGGCGCCAAGCAGTGATGGCATCAGATTTTGCTATGGGACAGTTTCAGTTCTTGAAAAAATTACTTCTGGTTCATGGGCACTGGAATTATCAGCGTGTTGGTTATTTAGTTCTGTACAACTTCTACCGCAATGCTGTCTTTGTAATGATGTTATTTTGGTATGTATGGTATATATTATGCACGGCTTTTTCTACAACTTCTGCGCTGACGGATTGGAGTAGTGTTTTCTATTCTGTGATATACACATCTATACCTACCATTATTGTTGGTATTCAGGACAAGGACTTGAGCCATAGGACACTCTTGCAGTATCCGAAACTGTATGGTGCAGGTCACAGGCAAGAAGCTTACAATATGCAATTATTTTGGATCACAATGATGGACACAGTATGGCAGAGCCTTGTTCTTTTCTACATCCCATTGTTCACCTATAAGGACAGTTCAATTGACATATGGAGCATGGGCAGTTTGTGGACGATTGCAGTTGTTATCCTTGTAAATGTACACCTTGCTATGGACATCAACCGTTGGGTATTAATTACTCATGTTGCTATCTGGGGATCAATAATCATTACATATGGTTGCATGGTGGTACTGGATTCTATACCTGTGTTTCCCAATTACTGGACTATTTATCATCTGGCAAGGTCCCCTACATATTGGATAACAATTTTGCTTATAATTATTGTGGCATTGCTCCCTCGCTTTACTTGCAAAGTTGTTTATCAAATCTTTTGGCCTTCGGATATCCAGATAGCTAGAGAAGCTGAGTTAATGAGAAAACGACATGATAATTTGCAGCCGAGGCAACAAGTTTCCAGTTAA 3903 0.4256 MSSNESLLLESSDSRPVIHHRRGKSGSRSYLSLHGSFSSSAFDDAFAESIVLDVKERDGGDVVLSRDCSLYTAAFGNNISGSEAQSPWQFPLECPQPETKSPVSWGAMELPDAANSRSVPFEISGASSQVQDSRLNGKSQRIRHKSLQFDDAALHEDSARLIYINDPRRTNDKYEFTGNEIRTSRYTFVTFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDGYEDWRRHRSDRNENNRESLVLQSGDFRSKKWKKIQAGEVVKIFADETIPADMVLLGTSDQSGLAYIQTMNLDGESNLKTRYARQETASAVASEACDVFGVIRCEQPNRNIYEFTANMEFNGLKFSLSQSNIVLRGCQLKNTDWIIGVVVYAGQETKAMLNSAASPSKRSRLETYMNRETLWLSIFLFIMCLVVAIGMCLWLVRHKNQLDTLPYYRKRYFTNGPDNGKKYKYYGIPMEAFFSFLSSVIVFQIMIPISLYITMELVRLGQSYFMIEDRDMYDACSGSRFQCRSLNINEDLGQIRYVFSDKTGTLTENKMEFQRASVHGKNYGSSLPMVDNTAAAADVIPKRSWKLKSAIAVDSELMTMLQKDSNREEKIAAHEFFLTLAACNTVIPILGDDEFSSIGTNEVNEDIRRIDYQGESPDEQALVSAASAYGYTLFERTSGHIVIDVNGEKLRLDVLGLHEFDSVRKRMSVVIRFPDNAVKVLVKGADTSMFSILENGSESNNNIWHATQSHLNEYSSQGLRTLVVASRDLSGAEHEEWQSRYEEASTSLTDRATKLRQTAALIESNLKLLGATGIEDKLQEGVPEAIEALRQAGIKVWVLTGDKQETAISIGLSCKLLSGDMQQIIINGTSEVECRNLLADAKAKYGVKSSSGGCRNQKHKTNAGHGDLDIPNGSKSLSFPKCNPGNEEGTDAPLALIIDGNSLVYILEKELESELFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFQFLKKLLLVHGHWNYQRVGYLVLYNFYRNAVFVMMLFWYVWYILCTAFSTTSALTDWSSVFYSVIYTSIPTIIVGIQDKDLSHRTLLQYPKLYGAGHRQEAYNMQLFWITMMDTVWQSLVLFYIPLFTYKDSSIDIWSMGSLWTIAVVILVNVHLAMDINRWVLITHVAIWGSIIITYGCMVVLDSIPVFPNYWTIYHLARSPTYWITILLIIIVALLPRFTCKVVYQIFWPSDIQIAREAELMRKRHDNLQPRQQVSS 1300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02501 1300 Gene3D - 815 1043 IPR023214 -
Gma09g02501 1300 PRINTS P-type cation-transporting ATPase superfamily signature 1003 1022 - -
Gma09g02501 1300 PRINTS P-type cation-transporting ATPase superfamily signature 549 563 - -
Gma09g02501 1300 SFLD p-type atpase 533 1054 IPR044492 -
Gma09g02501 1300 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 153 1298 - -
Gma09g02501 1300 Gene3D - 235 405 - -
Gma09g02501 1300 MobiDBLite consensus disorder prediction 1 28 - -
Gma09g02501 1300 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 176 1281 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Gma09g02501 1300 Pfam Phospholipid-translocating ATPase N-terminal 162 227 IPR032631 -
Gma09g02501 1300 SUPERFAMILY HAD-like 536 1047 IPR036412 -
Gma09g02501 1300 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 555 832 IPR023299 GO:0000166
Gma09g02501 1300 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 809 867 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma09g02501 1300 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 973 1089 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma09g02501 1300 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 482 572 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma09g02501 1300 Gene3D - 661 796 IPR023299 GO:0000166
Gma09g02501 1300 Pfam E1-E2 ATPase 260 507 - -
Gma09g02501 1300 ProSitePatterns E1-E2 ATPases phosphorylation site. 551 557 IPR018303 -
Gma09g02501 1300 SFLD Haloacid Dehalogenase 533 1054 - -
Gma09g02501 1300 CDD P-type_ATPase_APLT_Dnf-like 178 1166 - -
Gma09g02501 1300 SUPERFAMILY Calcium ATPase, transmembrane domain M 176 1273 IPR023298 -
Gma09g02501 1300 Pfam Phospholipid-translocating P-type ATPase C-terminal 1031 1274 IPR032630 -
Gma09g02501 1300 SUPERFAMILY Calcium ATPase, transduction domain A 259 401 IPR008250 -
Gma09g02501 1300 Pfam Cation transport ATPase (P-type) 654 740 - -
Gma09g02501 1300 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 153 1298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02501 Gma-Chr9 50326805 50332588 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g02501 139 1283 Primary Pumps ATPases AT5G04930 56.944 0.0 1334
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02501 K14802 - gmx:100812459 2545.38