Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02469 ATGGGCAATTGCGGAAGCAGAGAGGAATCTGCCGTAGTTTCCAAGGCTCAAGTTGTTCAGCAGCTTCACCATGCGACGTCGTTGGGCGCCAGTGCCAGGACCGACAAGAAGCACGCTCACAGGCACAATCTCAGCGAGTGCGCTTCGGATCTCAGCGAGTCCTGTTCCACACCGCGCGGTAACAATAGCAGCAACACGCTGCTCTACACGCACGTCATCGCTTTCACGCTCTACGAGTTGGAGACCATAACCAAGAGCTTCCGCGCCGACTACATCCTCGGCGAGGGAGGCTTCGGCACCGTTTACAAAGGCTACATTGATGAGAACGTCAGAGTCGGACTCAAATCGCTCCCTGTAGCTGTCAAAGTCTTAAACAAAGAGGGTTTACAAGGACATCGAGAGTGGCTTACGGAGGTGAATTTTCTCGGGCAGCTGAGGCATCCTAATcTGGTGAAGTTGATTGGGTACTGTTGTGAAGATGATCACAGGCTGCTTGTGTATGAGTTCATGTTCCGAGGGAGTTTGGAAAATCACTTATTCCGAAAGGCAACTGTCCCTTTATCATGGGCTACAAGAATGATGATTGCTCTTGGAGCAGCCAAAGGACTTGCCTTTCTCCACAATGCTGAAAGGCCTGTAATCTATCGCGACTTCAAAACCTCTAATATATTATTGGACTCCGACTATACAGCCAAACTTTCTGATTTTGGACTAGCTAAAGCAGGACCACAAGGTGATGAAACCCATGTATCTACCCGAGTCATGGGTACCTATGGTTATGCTGCCCCTGAATATGTAATGACTGgccacctgacggctaggagtgacgtctatagctttggcgttgttcttttggagcttttaacaggGAGGAAATCTGTTGACAAGACCAGACCTGGAAAGGAACAGAGCTTGGTAGATTGGGCACGGCCGAAGCTCAATGACAAGAGAAAGCTCCTTCAAATAATTGATCCTAGATTGGAGAATCAATACTCAGTGAGGGCAGCACAAAAAGCATGTAGCTTGGCTTATTACTGTTTGAGTCAAAATCCCAAAGCAAGGCCACTAATGAGTGATGTAGTTGAGACATTGGAGCCCTTGCAAAGTTCAAGTGTTGGTCCAGGTGAAGTCTCATTATCTGGATCAAATAGTGGGAGTGCTGGGCCTTTTGCCATGAACAAAATCTCTGACTGCCGGATGCGCCACAAGTTTTCAAACAATGTTGGTCCCGGTGCTACTTGTCGGTCTCCAAACCCGAATTGCTCACCAGGTGGCCCAGCTACATTACGGGTCAGATGA 1299 0.4611 MGNCGSREESAVVSKAQVVQQLHHATSLGASARTDKKHAHRHNLSECASDLSESCSTPRGNNSSNTLLYTHVIAFTLYELETITKSFRADYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIALGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPGKEQSLVDWARPKLNDKRKLLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQSSSVGPGEVSLSGSNSGSAGPFAMNKISDCRMRHKFSNNVGPGATCRSPNPNCSPGGPATLRVR 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02469 432 PANTHER OS01G0588500 PROTEIN-RELATED 31 419 - -
Gma09g02469 432 Gene3D Phosphorylase Kinase; domain 1 48 169 - -
Gma09g02469 432 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL8-RELATED 31 419 - -
Gma09g02469 432 CDD STKc_IRAK 93 367 - -
Gma09g02469 432 MobiDBLite consensus disorder prediction 409 432 - -
Gma09g02469 432 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
Gma09g02469 432 ProSitePatterns Protein kinases ATP-binding region signature. 93 122 IPR017441 GO:0005524
Gma09g02469 432 Pfam Protein tyrosine and serine/threonine kinase 92 364 IPR001245 GO:0004672|GO:0006468
Gma09g02469 432 ProSiteProfiles Protein kinase domain profile. 87 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g02469 432 SUPERFAMILY Protein kinase-like (PK-like) 60 365 IPR011009 -
Gma09g02469 432 Gene3D Transferase(Phosphotransferase) domain 1 170 374 - -
Gma09g02469 432 MobiDBLite consensus disorder prediction 409 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02469 Gma-Chr9 50047545 50051091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g02469 61 364 Glycoside Hydrolase AT3G07070 53.074 1.41e-108 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gma09g02469 PK_Tyr_Ser-Thr 4.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02469 - - gmx:100796854 866.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02034 18 53675972 53679340 Gma09g02469 09 50047545 50051091 GST