Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02460 atggaaggaagagaagggataagttctggggttacagtgataggagcagaagctccatcagcctatcacatggcaccaaggagtgaagctccaagccaggttcctccacctgttcctgaagcaacagctggagctattggtgtctcaccAGCGAGTGTGGGATTGGATGGAACAGCAGCTAAGAAGAAAAGGGGTAGACCAAGGAAATATGGGCCAGATGGGTTGAACTCTATGGCATTGTCACCCATTCCAATCTCATCTTCAGCTCCATTTGCTAATGAATTCTCGTCCGGGAAGCAGCGGGGGAAACCGCGAGCGATGGAGTACAAGCTGCCGAAGAAAGTTGGAGTGGATCTTTTTGGTGATTCTGTTGGTACAAACTTTATGCCCCATATCATTACGGTCAATACTGGCGAGGACATTACAATGAAGGTTATATCTTTTTCCCAACAAGGACCCCGTGCTATATGCATCCTATCTGCTAGTGGTGTAATTTCAAATGTTACACTTCGTCAGCCTGATTCTTCTGGGGGAACCTTGACCTATGAGGGCCGTTTTGAGATACTTTCATTATCTGGATCATTCATGCCTACTGACAACCAAGGAACAAGAAGCAGATCAGGTGGGATGAGTGTTTCATTGTCAAGTCCAGATGGTCGCATTGTAGGTGGTGGAGTTGCTGGTCTCCTTGTAGCTGCTGGTCCTGTGCAGGTGGTGGTGGGAAGCTTTTTGCCAAACAACCCGCAAGATAAGAAACCAAAGAAGCCAAAGTCTGATTATGCACCAGCTAATGTCACCCCTTCCATTGCAGTGTCTTCTGCGCCACCCCCTACTAATGGTGAAAAGGAGGATGTCATGGGTGGACACCTACTGCACAACAACTCAGGAACAACCCTTAACTCGAACTTTTCTCCTCCCTCGGCCTTTCGTCGAGAAAACTGGGTTAACATGCACTCCATGGCCGACTCGATGAAGTTGGTTACTGACATTAACATATCTCTTCCTGATAGTTAA 1014 0.4004 MEGREGISSGVTVIGAEAPSAYHMAPRSEAPSQVPPPVPEATAGAIGVSPASVGLDGTAAKKKRGRPRKYGPDGLNSMALSPIPISSSAPFANEFSSGKQRGKPRAMEYKLPKKVGVDLFGDSVGTNFMPHIITVNTGEDITMKVISFSQQGPRAICILSASGVISNVTLRQPDSSGGTLTYEGRFEILSLSGSFMPTDNQGTRSRSGGMSVSLSSPDGRIVGGGVAGLLVAAGPVQVVVGSFLPNNPQDKKPKKPKSDYAPANVTPSIAVSSAPPPTNGEKEDVMGGHLLHNNSGTTLNSNFSPPSAFRRENWVNMHSMADSMKLVTDINISLPDS 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02460 337 Gene3D - 130 261 - -
Gma09g02460 337 MobiDBLite consensus disorder prediction 291 306 - -
Gma09g02460 337 MobiDBLite consensus disorder prediction 244 306 - -
Gma09g02460 337 ProSiteProfiles PPC domain profile profile. 125 266 IPR005175 -
Gma09g02460 337 CDD DUF296 130 243 IPR005175 -
Gma09g02460 337 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 336 IPR039605 GO:0003680
Gma09g02460 337 SUPERFAMILY AF0104/ALDC/Ptd012-like 128 247 - -
Gma09g02460 337 Pfam Plants and Prokaryotes Conserved (PCC) domain 130 243 IPR005175 -
Gma09g02460 337 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 1 336 - -
Gma09g02460 337 MobiDBLite consensus disorder prediction 20 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02460 Gma-Chr9 49961270 49964915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g02460 10 274 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 56.711 1.38e-96 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02460 - - gmx:100791563 610.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02043 18 53787866 53791608 Gma09g02460 09 49961270 49964915 GST
Gma09g02460 09 49961270 49964915 Gma01g01473 01 49845868 49853144 PCT
Gma01g01473 01 49845868 49853144 Gma09g02460 09 49961270 49964915 PCT