Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02458 ATGATGAGCAGCGGTAGTGGTAGTGGCAGCAGTAGTGGTAGCCCTTGTGGTGCTTGCAAGTTCTTGAGGAGGAAGTGTATTCCGGGTTGTATATTTGCTCCGTACTTTGATTCAGAGCAAGGTACAAGCCATTTTGCGGCGGTGCACAAGGTTTTTGGGGCCAGCAATGTGTCCAAGCTTCTCCTTAGCATTCCAGTGCATAGGAGGCTTGATACGGTCATCACCATTTGTTATGAAGCACAATCAAGGATCAGAGATCCTGTTTATGGCTGTGTTTCCCACATCTTTGCCCTTCAGCAACAGGTGGTGAGCTTACAAGCAGAACTCTCTTACCTACATGGCCACCTTGCTCAAATGGAGTTACCTCAACCACCACCACCTCTTCCACTGCCACAAACGATGGCGGCACCACCGCCCGGTTTCTCGATTGCAGACCTACCGTCCGCCACCGTGGCGGCAGCGGCGGCCACCACCTATGATTTGTCTTCACTTTTTGATCCACTGGGCCAAACTTCATGGGCCATGCAACAGAGAGCCATAGACCCACGTCAATACAACATGGCTGCTGCTCCATCAACCGCCACTACTGGTGCTGACATTCAAGCAGTGGCAAGTGACATTCCTCATAGGCACGGGTCTCCTCCATCTCCTCCTGCGTCAAGCTCCAATGCTTCACCATCTCTATCGCTTTCTAAATGA 699 0.515 MMSSGSGSGSSSGSPCGACKFLRRKCIPGCIFAPYFDSEQGTSHFAAVHKVFGASNVSKLLLSIPVHRRLDTVITICYEAQSRIRDPVYGCVSHIFALQQQVVSLQAELSYLHGHLAQMELPQPPPPLPLPQTMAAPPPGFSIADLPSATVAAAAATTYDLSSLFDPLGQTSWAMQQRAIDPRQYNMAAAPSTATTGADIQAVASDIPHRHGSPPSPPASSSNASPSLSLSK 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02458 232 MobiDBLite consensus disorder prediction 190 232 - -
Gma09g02458 232 ProSiteProfiles LOB domain profile. 14 116 IPR004883 -
Gma09g02458 232 Pfam Lateral organ boundaries (LOB) domain 15 112 IPR004883 -
Gma09g02458 232 PANTHER LOB DOMAIN-CONTAINING PROTEIN 18 4 211 - -
Gma09g02458 232 PANTHER LOB DOMAIN CONTAINING PROTEIN 4 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02458 Gma-Chr9 49936397 49939867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g02458 18 232 AS2 family AT2G45420 58.333 3.33e-77 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gma09g02458 LOB 8.9e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02458 K21994 - gmx:100790517 370.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02045 18 53818761 53822819 Gma09g02458 09 49936397 49939867 GST
Gma09g02458 09 49936397 49939867 Gma01g01481 01 49989383 49994103 PCT
Gma01g01481 01 49989383 49994103 Gma09g02458 09 49936397 49939867 PCT