Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02430 ATGAATGTGATGCGAAGGTTGAAAAGCATTGCTTCTGGGAGGACTTCCATTTCATCAGATCCTGGAGGGGATTGTACCACAAAAAGAGCAAAGTTTGATCAAGACACCGAAGGAAAGGTCAATGAGGAAACATATCCTAATGAGAGGTGCGGAAAAGATCAGGAACACCATGTAGATTCCAATGTTCCTTCAGTGCCTAGAACTGAGAAGTCAGGTTATGATCAGCTTCCAAAAGAATTAAATGAAATGAAGATTGGAGATGACAAAGGCAAAAACAACAATGAGAAGGATATGGAAGCAACTATTGTGAGTGGTAATGGAACAGAAACCGGTGAAATTATTACAACTGCTATTGGAGGTCGAGACGGACAACCAAAGCGGACAATCTCATACATAGCAGAACGTGTGGTTGGCACTGGTTCTTTTGGTGTTGTTTATCAGGCTAAGTGCCTTGAAACTGGTGAAGCAGTTGCAATAAAAAAAGTGTTGCAAGACAAGAGATATAAGAATAGGGAACTGCAGGTTATGCGAATGCTTGACCATACTAATGTTCTCAGACTAAAACACTGTTTCTATTCAACTGCTGAGAAAGATGATTTGTACCTTAACCTAGTTTTGGAGTATGTACCTGAAACTGTCTACAGAGTTTCAAAGCACTATGTCAGAATGCACCAACATATGCCTATCATTAATGTGCAACTGTATACATACCAGATATGTCGGGGTTTAAATTATTTGCATCATGTGATTGGAGTCTGCCATCGGGACATCAAACCCCAGAATCTATTGGTTAATCCCCAGACTCATCAGTTAAAAGTATGTGATTTTGGGAGTGCAAAGATGTTGGTGCCTGGCGAACCCAACATATCGTATATATGCTCGCGGTATTATAGAGCTCCAGAACTTATATTTGGTGCAACAGAATACACAACTGCTATTGATATTTGGTCTGCTGGTTGTGTGTTGGCTGAGCTTCTTCTAGGACATCCAATGTTTCCCGGAGAGAGTGGGGTTGATCAATTGGTAGAGATCATTAAGATCTTGGGAACACCAACCAGAGAAGAAATAAAGTGCATGAATCCAAATTACACCGAATTTAAGTTTCCTCAGATAAAAGCACACCCATGGCATAAGGTTTTTCACAAGAAGATGCCTTCAGAAGCAGTGGATCTAGTGTCAAGGATGCTTCAGTATTCACCGAATCTACGATGCACTGCTTTGGAAGCATGTGCACACCCTTTCTTTGATGATCTGCGAGAACCAAATGCATGCTTGCCAAATGGGCGACCATTGCCTCCATTGTTCAACTTCACTGCTCAAGAACTGGCGGATGCACCCGATGAGTTGCGTAGGCGTCTCATTCCTGAGCATGCAAGAAGTTGA 1383 0.4187 MNVMRRLKSIASGRTSISSDPGGDCTTKRAKFDQDTEGKVNEETYPNERCGKDQEHHVDSNVPSVPRTEKSGYDQLPKELNEMKIGDDKGKNNNEKDMEATIVSGNGTETGEIITTAIGGRDGQPKRTISYIAERVVGTGSFGVVYQAKCLETGEAVAIKKVLQDKRYKNRELQVMRMLDHTNVLRLKHCFYSTAEKDDLYLNLVLEYVPETVYRVSKHYVRMHQHMPIINVQLYTYQICRGLNYLHHVIGVCHRDIKPQNLLVNPQTHQLKVCDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVLAELLLGHPMFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKVFHKKMPSEAVDLVSRMLQYSPNLRCTALEACAHPFFDDLREPNACLPNGRPLPPLFNFTAQELADAPDELRRRLIPEHARS 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02430 460 MobiDBLite consensus disorder prediction 1 72 - -
Gma09g02430 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 252 264 IPR008271 GO:0004672|GO:0006468
Gma09g02430 460 CDD STKc_GSK3 126 418 IPR039192 -
Gma09g02430 460 MobiDBLite consensus disorder prediction 26 63 - -
Gma09g02430 460 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 6 460 - -
Gma09g02430 460 ProSitePatterns Protein kinases ATP-binding region signature. 137 161 IPR017441 GO:0005524
Gma09g02430 460 Gene3D Phosphorylase Kinase; domain 1 116 210 - -
Gma09g02430 460 SMART serkin_6 131 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g02430 460 Pfam Protein kinase domain 133 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g02430 460 PANTHER SHAGGY-LIKE KINASE 6 460 - -
Gma09g02430 460 Gene3D Transferase(Phosphotransferase) domain 1 211 459 - -
Gma09g02430 460 ProSiteProfiles Protein kinase domain profile. 131 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g02430 460 MobiDBLite consensus disorder prediction 9 23 - -
Gma09g02430 460 SUPERFAMILY Protein kinase-like (PK-like) 130 443 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02430 Gma-Chr9 49624397 49628964 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g02430 137 424 Core Cell Cycle Gene Families AT1G76540 35.548 8.17e-56 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Gma09g02430 Pkinase 2e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02430 K00924 - gmx:100784150 937.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02086 18 54386370 54390467 Gma09g02430 09 49624397 49628964 GST