Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02428 ATGAGTTTTGGGGGATTTCTTGAGACCAAACAAAGTGGTGGAGGTGGAGGTAGGATCGTAGCAGATATTCCTTACAGCAACAACAGCAACAATATAATGCCCTCTAGTGCTATCTCGCAGCCTCGTTTAGCCACTCCTACTTTGGTCAAATCCATGTTCAACTCCCCTGGTCTTTCTCTTGCACTTCAAAGTGATATAGATGGAAAAAGGGATGTGAACAGATTAATGCCCGAGAATTTCGAGCAGAATGGTTTGAGAAGGAACCGGGAAGAGGAGCATGAAAGCAGATCTGGCAGTGACAACATGGATGGTGGTTCTGGTGATGATTTTGATGCTGCCGACAACCCACCGAGGAAAAAACGCTATCACCGACACACTCCTCAGCAAATTCAAGAGCTTGAATCGCTCTTCAAGGAGTGTCCTCACCCGGATGAGAAACAAAGGCTTGAACTCAGCAGAAGGCTTAATTTGGAAACGAGGCAAGTAAAGTTTTGGTTCCAAAATCGAAGAACACAAATGAAGACACAATTGGAACGGCACGAGAACTCACTCCTAAGGCAAGAGAATGACAAGCTTAGAGCAGAAAACATGTCTATGAGGGAAGCCATGAGGAATCCAATATGCACAAACTGTGGAGGTCCTGCAATGATTGGTGAAATTTCACTCGAAGAACAGCATCTTAGAATTGAGAATGCTAGATTGAAGGACGAACTAGACCGTGTTTGTGCACTCGCTGGCAAGTTTTTAGGTCGACCCATTTCATCTCTAACAGGCTCAATTGGGCCTCCATTGCCAAACTCAAGCTTGGAGCTTGGTGTTGGGAGCAATGGTTTTGGAGGATTAAGCACTGTGCCTTCAACAATGCCTGATTTTGGGGTTGGAATATCAAGCCCTTTAGCTATGGTGTCACCTTCAAGTACTAGACCAACCACAACAGCAACAACAACATTGGTGACTCCTCCTTCTGGCTTTGACAACAGATCAATTGAGAGGTCTATTGTTCTTGAACTTGCTTTGGCTGCAATGGATGAGTTGGTGAAGATGGCTCAGACTGATGAGCCTCTTTGGATCAGAAGCTTGGAAGGTGGAAGAGAAATTCTCAACCATGACgagtacacaaggactatcactccttgcattggcttgagacccaatggctttgtcactgaggcctctagacaaactggcatggtcatcataaacAGCTTGGCCCTTGTTGAAACATTAATGGACTCAAATCGTTGGTCAGAGATGTTCCCTTGTATGATTGCTAGAACCTCAACCGCTGAAGTTATATCTAATGGAATAAATGGAACTAGAAATGGTGCCCTTCAGCTAATGCATGCTGAGCTTCAAGTTCTTTCTCCCTTGGTTCCTGTTCGTGAGGTCAATTTTCTACGCTTTTGCAAGCAGCACGCAGAGGGGTTATGGGCAGTGGTAGATGTGTCCATAGATACCATCCGAGACACTTCTGGTGCACCCACTTTTGTGAACTGTAGGAGGCTTCCTTCTGGTTGCGTGGTGCAAGATATGCCAAATGGTTACTCTAAGGTGACATGGGTGGAACATGCAGAATACGACGAAAGCCAAATTCACCAGCTCTATAGACCCTTGTTGAGCTCAGGCATGGGGTTTGGTGCACAACGTTGGGTTGCCACTCTTCAACGCCAATGCGAGTGCCTAGCTATTCTAATATCCTCAGCAGTTCCCTCTAGAGAACATTCAGCAATAAGTTCAGGTGGAAGGAGAAGCATGTTGAAGCTGGCACAGCGCATGACGAACAACTTCTGTGCTGGTGTGTGTGCCTCAACAGTGCACAAGTGGAACAAGCTGAACGCGGGAAACGTGGGGGAGGACGTGAGGGTGATGACGAGGAAGAGCGTGGATGACCCCGGTGAACCGCCGGGGATCGTCCTCAGTGCCGCCACCTCGGTGTGGCTTCCCGTCTCGCCACAGAGGCTCTTCGACTTCCTCCGTGACGAGCGGCTCCGGAGTGAGTGGGACATCCTCTCCAACGGTGGACCAATGCAAGAGATGGCTCACATTGCCAAGGGACAAGACCATGCTAACTGTGTCTCCCTCCTTAGAGCCAGTGCTATAAATGCGAACCAGAGCAGCATGTTGATTCTGCAAGAGACGTGCACAGACGCGTCGGGGTCGCTTGTGGTGTACGCGCCGGTGGACATTCCGGCAATGCACGTCGTGATGAACGGCGGCGACTCTGCTTACGTGGCGCTTCTTCCGTCGGGGTTCGCCATCGTGCCCGACGGGTCCGTCGAGGAGAACGGTGGCGCGTCGCAGCAGAGGGCGGCGAGTGGCGGGTGCCTCCTGACGGTGGCGTTTCAGATTCTGGTGAACAGCCTCCCCACGGCGAAGCTCACGGTGGAGTCGGTGGAGACGGTGAACAACCTCATCTCCTGCACCGTGCAGAAGATCAAATCAGCGCTTCACTGCGAAAGCTGA 2463 0.4815 MSFGGFLETKQSGGGGGRIVADIPYSNNSNNIMPSSAISQPRLATPTLVKSMFNSPGLSLALQSDIDGKRDVNRLMPENFEQNGLRRNREEEHESRSGSDNMDGGSGDDFDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSRRLNLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSMREAMRNPICTNCGGPAMIGEISLEEQHLRIENARLKDELDRVCALAGKFLGRPISSLTGSIGPPLPNSSLELGVGSNGFGGLSTVPSTMPDFGVGISSPLAMVSPSSTRPTTTATTTLVTPPSGFDNRSIERSIVLELALAAMDELVKMAQTDEPLWIRSLEGGREILNHDEYTRTITPCIGLRPNGFVTEASRQTGMVIINSLALVETLMDSNRWSEMFPCMIARTSTAEVISNGINGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGLWAVVDVSIDTIRDTSGAPTFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQIHQLYRPLLSSGMGFGAQRWVATLQRQCECLAILISSAVPSREHSAISSGGRRSMLKLAQRMTNNFCAGVCASTVHKWNKLNAGNVGEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFDFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHANCVSLLRASAINANQSSMLILQETCTDASGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGSVEENGGASQQRAASGGCLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKSALHCES 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02428 820 Coils Coil 170 205 - -
Gma09g02428 820 ProSiteProfiles 'Homeobox' domain profile. 116 176 IPR001356 GO:0003677
Gma09g02428 820 MobiDBLite consensus disorder prediction 83 99 - -
Gma09g02428 820 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 64 817 IPR042160 -
Gma09g02428 820 MobiDBLite consensus disorder prediction 303 322 - -
Gma09g02428 820 SMART HOX_1 117 180 IPR001356 GO:0003677
Gma09g02428 820 CDD homeodomain 118 176 IPR001356 GO:0003677
Gma09g02428 820 ProSiteProfiles START domain profile. 327 563 IPR002913 GO:0008289
Gma09g02428 820 Pfam Homeodomain 119 174 IPR001356 GO:0003677
Gma09g02428 820 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG1 64 817 - -
Gma09g02428 820 MobiDBLite consensus disorder prediction 77 126 - -
Gma09g02428 820 Pfam START domain 336 560 IPR002913 GO:0008289
Gma09g02428 820 SUPERFAMILY Bet v1-like 588 813 - -
Gma09g02428 820 ProSitePatterns 'Homeobox' domain signature. 151 174 IPR017970 GO:0000981|GO:0006355
Gma09g02428 820 SUPERFAMILY Bet v1-like 329 560 - -
Gma09g02428 820 Gene3D - 107 192 - -
Gma09g02428 820 SUPERFAMILY Homeodomain-like 102 176 IPR009057 -
Gma09g02428 820 CDD START_ArGLABRA2_like 331 559 - -
Gma09g02428 820 SMART START_1 336 560 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02428 Gma-Chr9 49598218 49604299 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g02428 1 820 Homeobox Transcription Factor Family AT3G61150 64.833 0.0 1046
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Gma09g02428 START 7.6e-57 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02428 K09338 - gmx:100783614 1578.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02087 18 54409926 54415727 Gma09g02428 09 49598218 49604299 GST