Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02420 ATGGTGGAAGATGGCGATGAGGTTGCGGTAGATGCTCGTTCCACAGAAGACTGGTTGTTGCATGCACAAGAACTTGTTCCTGTTGTCATTGATAAGGCAAGAGAGGTCAAGGGATTTGCCGGTAGATGGAAGATGATTGTCGCAAAACTGGAACAGATCCCTTTGCGGTTATCGGATTTGTCAAGCCATCCATGCTTCTCGAAGAATGCTCTTTGCAAGGAGCAGTTGCAGGCTGTGTCAAAGACACTTGGGGAAGCGATTGAATTGGCTGAGTTATGTTTGAAGGAGAAGTATGAGGGTAAGCTTCGGATGCAGAGCGATCTAGATTCATTGTCTGGGAAGCTTGATTTGAATTTGAGGGATTGTGGGCTTCTGATCAAGACTGGTGTGCTTGGTGAGGCTACTTTGCCATTGGCTGTGTCTAGTTCTGTGGCAGAATCAGATGTTGCAACATACAACAACATAAGGGAGTTGCTGGCACGCCTTCAGATCGGGCACTTGGAAGCGAAGCACCGAGCTTTAGACAGCGTCGTTGAGGCCATGAAGGAGGATGAGAAGAGTGTTTTATCTGTTCTTGGTCGGAGCAATATTGCTGCTTTGGTTCAATTGCTTACAGCTACCTCTCCCAGGATAAGAGAGAAAACAGTTACTGTTATAAGCTCGCTTGCAGAATCCGGTAGCTGCGAAAATTGGCTAGTTTCTGAAGGAGTTCTGCCACCTCTTATAAGGCTTGTTGAATCTGGCAGCACGGTGGGGAAGGAAAAGGCCACAATATCCCTTCAGAGGTTGTCGATGTCAGCCGAAACAGCACGAGCAATCGTGGGACACAGTGGGGTTCGTCCATTGGTTGAACTTTGTCAAATCGGTGATTCTGTGTCACAGGCCGCGGCTGCGTGTACTCTGAAGAACATATCAGCTGTGCCTGAGGTTAGACAAGCTTTGGCTGAAGAAGGGATTGTGAGGGTAATGATCAATCTGCTTAACTGTGGAATTCTGTTAGGTTCGAAAGAGCATGCTGCAGAGTGCTTGCAGAACCTCACTGCAAGCAATGAGAATCTAAGGAGGAATGTCATATCAGAAGGTGGTGTTAGGAGTCTTCTGGCTTATCTTGATGGTCCACTTCCTCAGGAATCCGCGGTTGGAGCATTGAGGAACTTGGTTGGATCAGTTCCTGAGGAATCCTTGGTTTCCCTTGGTTTGATCCCCCGTTTGGCTCACGTGTTGAAGTCCGGATCCTTAGGTGCTCAGCAAGCAGCTGCAGCTGCGATATGTCGGGTTTGCAGCTCCACAGACATGAAGAAAATGGTTGGTGAAGCTGGCTGCATCCCTCTCCTTGTGAAGATGCTTGAGGCCAAGTCAAACAGTGTTAGAGAGGTTGCTGCCCAAGCAATTGCAAGCTTGATGGTTGTGTCTCAGAATCGAAGAGAGGTTAAGAAGGATGACAAGAGTGTGCCAAACTTGGTTCAGTTGCTTGATCATAGTCCTCAGAACACTGCAAAAAAATATGCTGTTACTTGCCTTGGATCACTTTCTTCATGTAAGAAATGTAAGAAGCTTATGATCTCATATGGGGCAATTGGGTATCTGAAGAAACTTACTGAGATGGACATTCCAGGAGCTAAAAAGCTGCATGAAAGGTTGGAAAGAGGGAAATTTAGAAGTTTATTTAGCAAGAAATAG 1680 0.4667 MVEDGDEVAVDARSTEDWLLHAQELVPVVIDKAREVKGFAGRWKMIVAKLEQIPLRLSDLSSHPCFSKNALCKEQLQAVSKTLGEAIELAELCLKEKYEGKLRMQSDLDSLSGKLDLNLRDCGLLIKTGVLGEATLPLAVSSSVAESDVATYNNIRELLARLQIGHLEAKHRALDSVVEAMKEDEKSVLSVLGRSNIAALVQLLTATSPRIREKTVTVISSLAESGSCENWLVSEGVLPPLIRLVESGSTVGKEKATISLQRLSMSAETARAIVGHSGVRPLVELCQIGDSVSQAAAACTLKNISAVPEVRQALAEEGIVRVMINLLNCGILLGSKEHAAECLQNLTASNENLRRNVISEGGVRSLLAYLDGPLPQESAVGALRNLVGSVPEESLVSLGLIPRLAHVLKSGSLGAQQAAAAAICRVCSSTDMKKMVGEAGCIPLLVKMLEAKSNSVREVAAQAIASLMVVSQNRREVKKDDKSVPNLVQLLDHSPQNTAKKYAVTCLGSLSSCKKCKKLMISYGAIGYLKKLTEMDIPGAKKLHERLERGKFRSLFSKK 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02420 559 Gene3D - 146 332 IPR011989 -
Gma09g02420 559 Pfam Armadillo/beta-catenin-like repeat 430 467 IPR000225 GO:0005515
Gma09g02420 559 Gene3D - 406 542 IPR011989 -
Gma09g02420 559 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 559 - -
Gma09g02420 559 SMART arm_5 429 469 IPR000225 GO:0005515
Gma09g02420 559 SMART arm_5 307 348 IPR000225 GO:0005515
Gma09g02420 559 SMART arm_5 266 306 IPR000225 GO:0005515
Gma09g02420 559 SMART arm_5 389 428 IPR000225 GO:0005515
Gma09g02420 559 SMART arm_5 470 512 IPR000225 GO:0005515
Gma09g02420 559 SMART arm_5 184 224 IPR000225 GO:0005515
Gma09g02420 559 SMART arm_5 349 388 IPR000225 GO:0005515
Gma09g02420 559 Gene3D - 333 405 IPR011989 -
Gma09g02420 559 SUPERFAMILY ARM repeat 156 536 IPR016024 -
Gma09g02420 559 Coils Coil 336 356 - -
Gma09g02420 559 PANTHER ARMADILLO/BETA-CATENIN-LIKE REPEAT PROTEIN 1 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02420 Gma-Chr9 49522127 49525829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g02420 401 542 U-box Gene Family AT2G23140 29.167 3.48e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02420 - - gmx:100781453 1025
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02096 18 54676315 54677988 Gma09g02420 09 49522127 49525829 GST