Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02418 ATGTTGGGTTCAGGCACCAATTTGGTGACAACGGTCATTGGGTTTGGGATGAGTGCCACTTTCATTGTGTTTGTGTGCACCAGAATCATTTGTGGAAGGCTAAGAGGGGGTGTTGAATCTCGGATGATGTATGAGATTGAATCAAGAATTGATTTAGAACAGCCAGAACATCATGTTAATGACCCTGACTCCGATCCTGTTCTGCTCGATGCAATCCCTACTTTGAAGTTCAACCAAGAGGCTTTCAGTTCCCTTGAACACACACAGTGTGTAATATGTTTGGCAGATTACAAAGAAAGAGAAGTATTGCGGATCATGCCCAAATGTGGCCACACTTTTCATCTTTCTTGCATTGATATATGGCTGAGAAAGCAATCTACCTGTCCAGTATGCCGTCTGCCGTTGAAAAACTCTTCCGAAACAAAACATGTGAGACCTGTGACATTTACCATGAGCCAATCCCTTGACGAGTCTCACACATCAGAAAGAAACGATGAAATCGAGAGACATGTTGAACCTACATCTACTGCAGCCAGCAACTCTTTACAACCAACTTCAGGGGAACAAGAAGCAAGGCAATGA 582 0.4347 MLGSGTNLVTTVIGFGMSATFIVFVCTRIICGRLRGGVESRMMYEIESRIDLEQPEHHVNDPDSDPVLLDAIPTLKFNQEAFSSLEHTQCVICLADYKEREVLRIMPKCGHTFHLSCIDIWLRKQSTCPVCRLPLKNSSETKHVRPVTFTMSQSLDESHTSERNDEIERHVEPTSTAASNSLQPTSGEQEARQ 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02418 193 MobiDBLite consensus disorder prediction 173 193 - -
Gma09g02418 193 MobiDBLite consensus disorder prediction 150 193 - -
Gma09g02418 193 PANTHER OS02G0676500 PROTEIN 1 183 - -
Gma09g02418 193 SMART ring_2 90 131 IPR001841 -
Gma09g02418 193 ProSiteProfiles Zinc finger RING-type profile. 90 132 IPR001841 -
Gma09g02418 193 PANTHER OS11G0150450 PROTEIN 1 183 - -
Gma09g02418 193 MobiDBLite consensus disorder prediction 158 172 - -
Gma09g02418 193 CDD RING-H2_EL5_like 89 132 - -
Gma09g02418 193 Pfam Ring finger domain 89 132 IPR001841 -
Gma09g02418 193 SUPERFAMILY RING/U-box 80 139 - -
Gma09g02418 193 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 66 142 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02418 Gma-Chr9 49491824 49494065 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g02418 79 182 C3H Transcription Factor Family AT4G10160 38.679 6.87e-19 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02418 - - gmx:100780922 395.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02098 18 54713461 54715811 Gma09g02418 09 49491824 49494065 GST