Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02413 ATGGCAAGCTCAGAAGAAGCAAAGCTCGAAACTTTCATGCAGTGGCTACAGGCAAATGGGGTGGAGCTACGAGGTTGCAAGATCAAGTGGTGTGATTCCAAACGAGGGTTTGGCATCTTTTCTGATAAAGATGTTTCTGATGGGGTTATGTTGGTTGTTCCACTAGATTTAGCAATTACTCCAATGAGGGTGTTGCAAGATCCTCTTCTAGGACCAGCATGTAGAGCAATGTTTGAAGAAGGAGATGTAGACGACAGGTTATTAATGATGCTGTTACTGACTGTGGAGCGTTTGCGTAAGAATTCTCTATGGAAGCCGTATCTTGATATACTTCCAACCACTTTTGGGAATCCACTTTGGTTTAGTGATGATGAACTTCAAGAGCTAAGAGGAACAAcattatatcgtgcaactgagttgcagAAGAAAAGCCTGCTTTCTTTGTATGAATCTAAAGTGAAGGATATAGTGAAGAAACTTTTGACTCTTGATGGAAATTCAGAGATGTATGCTTGCCTTCTTGCTAGGGCAAATTCAGTATTTTGGAGCCGTGCTTTGAACATTCCAATGCCTCGTTCTTATGTATTTCCAGAAATGCAAGATGCTCATGACATTTGCATTCGAGAAGCTGATGAAAAAAGAAGCCATGTTAAGAAATCTGACAATCAGACCAAAGAAGGGACATGTAACCCAATGACAGGAGACACTGTTTGGGTTGAGGGTCTTGTCCCTGGCATTGACTTTTGTAACCATGATCTGAAGCCAATAGCAACATGGGAAGTTGATGGAACTGGTTTAGCATCGGGAGTTCCTTTCTCCATGTATCTTATCTCTGCTGCTCAAAGTCCCTTGCAGATTGATCAAGAAATCTACATTAGTTATGGAAACAAGGGAAATGAGGAACTTCTATATCTGTATGGTTTTGTCATTGATGATAACACAGATGACTATCTCATGGTCCACTATCCAGCAGAAGCAATTAATACAATTTCTTTTTCTGAGTCCAAAACCCAGCTTCTTGAAGTGCAGaaggctgaaatgagatgtcttttacccaaaacttcattggataatggattttttccattaaacacccaaaacagtgaagaaaataacaagtccaaagctgacaaagtttgcaactatagttggagtggtcagcgcaagatgccatcttatgttaacaagctggtgtttcctgagaaatttatgactactttgaggaccatagccatgcaagaagatgaggttttcaaggtttcctcaatgctggaagagcttgctggacctgaaagggagaggcaactatcagatacagatgtccaatcagcagtgtgggaggtctgtggtgattctggagctttacaatcgcttgttgatcttcttcatgtgaaGATGATGGATCTTGAAGAGAGTTCTGGAACAGAGGAAAATGACCTTGATTTTCTCAAGAAAACCCTTATTATTGATAACCATGAAGATAGCAAACAATGCACGAGCAATTTAAGCACAAAGTCAAATGACTTAGAGGAACCAAAGTTGATGACTAGAAACAAGTGGTCTGCTATAGTATATAGGTGTGGCCAGAAGCAGCTAACTCGGTTATTCTTAGAAGAAGCAGAACATGCTTTGCAGTTATCACTGGGTGAAGAAAAGGTCACTTCTCCCTGTTAA 1674 0.31 MASSEEAKLETFMQWLQANGVELRGCKIKWCDSKRGFGIFSDKDVSDGVMLVVPLDLAITPMRVLQDPLLGPACRAMFEEGDVDDRLLMMLLLTVERLRKNSLWKPYLDILPTTFGNPLWFSDDELQELRGTTLYRATELQKKSLLSLYESKVKDIVKKLLTLDGNSEMYACLLARANSVFWSRALNIPMPRSYVFPEMQDAHDICIREADEKRSHVKKSDNQTKEGTCNPMTGDTVWVEGLVPGIDFCNHDLKPIATWEVDGTGLASGVPFSMYLISAAQSPLQIDQEIYISYGNKGNEELLYLYGFVIDDNTDDYLMVHYPAEAINTISFSESKTQLLEVQKAEMRCLLPKTSLDNGFFPLNTQNSEENNKSKADKVCNYSWSGQRKMPSYVNKLVFPEKFMTTLRTIAMQEDEVFKVSSMLEELAGPERERQLSDTDVQSAVWEVCGDSGALQSLVDLLHVKMMDLEESSGTEENDLDFLKKTLIIDNHEDSKQCTSNLSTKSNDLEEPKLMTRNKWSAIVYRCGQKQLTRLFLEEAEHALQLSLGEEKVTSPC 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02413 557 SUPERFAMILY SET domain 8 313 IPR046341 -
Gma09g02413 557 CDD SET_LSMT 32 309 - -
Gma09g02413 557 Pfam SET domain 36 295 IPR001214 GO:0005515
Gma09g02413 557 Gene3D set domain protein methyltransferase, domain 1 5 309 - -
Gma09g02413 557 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 3 550 - -
Gma09g02413 557 PANTHER SET DOMAIN-CONTAINING PROTEIN 3 550 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02413 Gma-Chr9 49442469 49449762 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g02413 1 369 NAC Transcription Factor Family AT3G56570 24.561 1.71e-07 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gma09g02413 SET 2.5e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02413 - - gmx:100793324 1085.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02104 18 54764982 54771856 Gma09g02413 09 49442469 49449762 GST