Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02396 ATGGATATGGCTTGTAGTTTGCCGCAGTCAAGAGTGTTGCATGGAGGTCTGGGGACGAGTTACAGACACAGATCAGTAGGTCAGTTAGGCTGCTTTGATTTTAGAGGGAGAGGTTTTGGTTGTGCTTCTTTTGGGGACTCGAGAAGTGTTTCAAGACTGCAGAGGAGCAGGATGAATGTTTCTGCTTGTTGGAATAATTCAAGAGTGGCTACTGGCAGGGAGTTTAAAGTTTTGAATACGAAGAGAAGTTTGTCTTGTAAGAAGAATAATAATCTTTTCATGGTGTCTCGAGTGATTTGGTCGAAGTGCCAGGGTAATGATTCTTTAGCCTATGTTAATGGCAATGGCCGGAATGTTGATTACGTGGAAGGTTCAGGTGAGGATGTAGGATTGGGGCCTGTTTCTAGTGCTGAACTGGATGCAACTTTGGAAGAAGAAGAAGGGCAAGCGGAGAGGAAAGAGGGAGGGAGTGAAATAGGATTAGAGGAACTGAGTGTGGATGAACTGAAAGAACTATTGCAAAAGGCCTTAAAGGAGCTAGAAGTAGCTCAAATAAATAGTACCATGTTTGAGGAAAAGGTTAAAAAAATATCAGAGACTGCCATTTCTTTGCATGATGAAGCAGTCAATTCTTGGAACAATGTTAATTCTACCCTTGGCACCATCCAAGAAATAGCAAATGAAGAACATACAGCCAAAGAAGTTGTACAAAATGCAACAATGGCTCTTTCATTAGCTGAGGCAAGGCTTCAAGTAGCCATAGAATCTTTGGAGGCTGCAAAAGAAGTTCCTGATTCAGCACAAGGTTCTAATGAGAACAGTGGTGATAAGGACACGGTGGATGAGGAGCAAGCTCTTTTGGTTGCTAAAGAAGATATCAAGGAATGCCAGGCTAATTTAGCCAATTGTGAGGCAGAGCTGAGGCATTTGCAAGATAGAAAGGAGGAGTTGCAGAAGGAAGTGAGCAAATTGCAAGAAATTGCTGAAAAGGCTCAGCTGAATGCGGTGAAAGCTGAAGAGGATGTTACAAACATAATGCTTTTGGCAGAGCAAGCTGTCGCCTTTGAACTTGAGGCTACAAAACTTGTAAATGATGCAGAGATTGCCCTACAGCGAGCAGATAAGTCTAATTCTAATTCAAATGCTGATACCATAGAATCTACACAAGCACAAGATGTTGTTGTGGCTGTTCCTGAAGAGGAGAAAGTGGTTCAAGGTTTTTCTGGTGATGTTGAAAGAGACAGAGATTTGGCAATTGACGACGAATCTGTGCTTGCCAATTTATCACCTGAAACACTATCTGATAAAACCAGCCAAGTTTTGGAAGACAAAACACAGTCTGATTATTTAAGTGATAATGAGAATGCTGTGCAAACAAAAAAGCAGGAAATACAGAAAGATTTGACCAGAGATAGTTCACTAGCTCCCAAGGCATTATTGAAAAAGTCTTCTCGATTCTTTTCTGCATCATTCTTCTCTTCTGCTGAAGATGGGACTGAGTTCACACCCGCATCAGTCTTCCAGAGCTTTGTATTATCTGTACAGAAGCAGTTGCCCAAGCTGATATTTGGGTTATTGTTAATGGGAGCAGGGGTTGCCTTCTATTCTAATAGAGTGGAGAGGAATGCTCAGCTGCTTACACAGGCAGATGTTATTATGACCAGTGTTGAAGAAGTTTCCTCTAGTGCAAAGCCTCTGTTTAGACAACTTCAGAAACTCCCCAAGAAAATCAAGAAAATCATTGCATCATTACCTCATCAAGAGGTGAACGAGGAAGAAGCCTCCCTCTTTGACATCCTCTGGTTATTACTTGCAAGTGTTATATTTGTGCCAATATTTCAAAAAATCCCTGGAGGCAGTCCTGTTCTTGGCTACTTGGCTGCCGGTATCTTGATTGGGCCTTATGGTCTCTCTATCATTCGTCACGTTCATGGGACAAAAGCAGTAGCTGAATTTGGAGTTGTTTTTCTTCTATTCAATATTGGCCTGGAGCTCTCTGTTGAAAGGCTTAGTTCAATGAAGAAATATGTCTTTGGATTAGGCTCTGCACAGGTGTTGGCAACTGCTGTAGCTGTCGGCTTGATGGCTCATTATATTTGCGGCCAAGCTGGTCCCGCTGCTATTGTCATTGGGAATGGCCTAGCATTATCATCCACTGCTGTTGTTCTGCAGGTGTTGCAGGAGAGAGGCGAGAGCACTTCACGGCATGGCCGAGCTACTTTTTCTGTGTTACTTTTTCAGGATCTGGCTGTCGTGGTCTTGCTAATACTCATACCTCTTATTTCTCCTAATTCTTCCAAAGGAGGGGTTGGTTTTCAAGCTATTGCTGAAGCACTTGGACTGGCTGCTGTTAAGGCAGCAGTTGCCATCACTGCTATAATTGCAGGGGGACGTTTGCTCCTTCGACCAATATACAAGCAGGTTGCAGAAAATCAAAATGCAGAAATTTTCTCAGCCAATACACTCCTTGTTATTCTTGGCACAAGTCTTCTTACAGCCAGAgcaggactttccatggcattgggagcatTTTTGGCTGGTTTACTACTGGCAGAAACTGAATTTTCCTTACAGGTTGAATCTGATATTGCTCCTTATCGTGGCCTTCTTTTGGGGCTCTTCTTTATGACGGTTGGAATGTCAATTGATCCAAAACTTCTTGTTTCAAACTTCCCAGTCATTACGGGCACACTAGGACTCTTAATATGTGGCAAGACTATCTTGGTTTGTTTGATAGGTAGAATGTTTGGGATTTCACTCATTTCTGCCATCAGAGTTGGTCTACTTCTTGCTCCTGGTGGGGAGTTTGCATTTGTGGCTTTTGGTGAAGCTGTTAATCAGGGCATAATGTCTTCCCAGCTGTCATCTTTGCTGTTTCTTGTTGTGGGCATTTCAATGGCCATCACACCATGGCTAGCTGCAGGAGGCCAGCTGATTGCTTCCCGCTTTGAGCAGAATGATGTTAGAAGTTTATTACCTGTAGAAAGTGAGACAGATGATCTGCAAGATCATATAATTATTTGTGGATTTGGACGAGTTGGCCAGATCATTGCCCAACTTCTTTCAGAGCGTCTTATTCCATTTGTCGCACTAGATGTAAGAAGTGATAGAGTGGCAGTTGGGCGTGCTTTGGATCTCCCTGTGTACTTTGGAGATGCTGGTAGTAGAGAGGTAGTCCTACATAAGGTTGGGGCTGAAAGGGCATGTGCTGCAGCAATAACTCTTGATACGCCTGGTGCAAATTATAGAACAGTTTGGGCTTTAAGCAAGTACTTCCCAAATGTGAAGACTTTTGTTCGTGCCCATGACGTTGATCATGGATTGAATTTAGAAAAGGCTGGAGCTACTGCTGTTGTCCCAGAGACCTTGGAACCAAGTCTTCAACTAGCAGCTGCTGTGCTTTCTCAGGCTAAACTCCCTACGTCGGAGATTGCAGCTACTATAAATGAATTCAGATCTCGACATCTGGCTGAGCTCACTGAGCTGTGTGAAGCAAGTGGAAGTTCTCTTGGTTATGGATTTAATAGAATTATGAACAAACCCAAATCTCCATCCCCAGATTCATTAGATGAGACCCCTGTCTCCGAAGGGACACTAGCAATATGA 3606 0.4273 MDMACSLPQSRVLHGGLGTSYRHRSVGQLGCFDFRGRGFGCASFGDSRSVSRLQRSRMNVSACWNNSRVATGREFKVLNTKRSLSCKKNNNLFMVSRVIWSKCQGNDSLAYVNGNGRNVDYVEGSGEDVGLGPVSSAELDATLEEEEGQAERKEGGSEIGLEELSVDELKELLQKALKELEVAQINSTMFEEKVKKISETAISLHDEAVNSWNNVNSTLGTIQEIANEEHTAKEVVQNATMALSLAEARLQVAIESLEAAKEVPDSAQGSNENSGDKDTVDEEQALLVAKEDIKECQANLANCEAELRHLQDRKEELQKEVSKLQEIAEKAQLNAVKAEEDVTNIMLLAEQAVAFELEATKLVNDAEIALQRADKSNSNSNADTIESTQAQDVVVAVPEEEKVVQGFSGDVERDRDLAIDDESVLANLSPETLSDKTSQVLEDKTQSDYLSDNENAVQTKKQEIQKDLTRDSSLAPKALLKKSSRFFSASFFSSAEDGTEFTPASVFQSFVLSVQKQLPKLIFGLLLMGAGVAFYSNRVERNAQLLTQADVIMTSVEEVSSSAKPLFRQLQKLPKKIKKIIASLPHQEVNEEEASLFDILWLLLASVIFVPIFQKIPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAVAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLATAVAVGLMAHYICGQAGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGVGFQAIAEALGLAAVKAAVAITAIIAGGRLLLRPIYKQVAENQNAEIFSANTLLVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLVSNFPVITGTLGLLICGKTILVCLIGRMFGISLISAIRVGLLLAPGGEFAFVAFGEAVNQGIMSSQLSSLLFLVVGISMAITPWLAAGGQLIASRFEQNDVRSLLPVESETDDLQDHIIICGFGRVGQIIAQLLSERLIPFVALDVRSDRVAVGRALDLPVYFGDAGSREVVLHKVGAERACAAAITLDTPGANYRTVWALSKYFPNVKTFVRAHDVDHGLNLEKAGATAVVPETLEPSLQLAAAVLSQAKLPTSEIAATINEFRSRHLAELTELCEASGSSLGYGFNRIMNKPKSPSPDSLDETPVSEGTLAI 1201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02396 1201 Pfam Sodium/hydrogen exchanger family 600 972 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Gma09g02396 1201 MobiDBLite consensus disorder prediction 1181 1201 - -
Gma09g02396 1201 PANTHER K(+) EFFLUX ANTIPORTER 1, CHLOROPLASTIC-RELATED 1 1201 - -
Gma09g02396 1201 Coils Coil 166 186 - -
Gma09g02396 1201 TIGRFAM 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 603 883 IPR004771 GO:0006812|GO:0008324|GO:0016021
Gma09g02396 1201 Pfam TrkA-N domain 1005 1119 IPR003148 GO:0006813
Gma09g02396 1201 ProSiteProfiles RCK N-terminal domain profile. 1004 1127 IPR003148 GO:0006813
Gma09g02396 1201 Coils Coil 243 263 - -
Gma09g02396 1201 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 1 1201 - -
Gma09g02396 1201 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1001 1143 IPR036291 -
Gma09g02396 1201 Gene3D - 1000 1165 - -
Gma09g02396 1201 Coils Coil 286 341 - -
Gma09g02396 1201 Gene3D - 592 980 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02396 Gma-Chr9 49289601 49302039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g02396 1 1201 Inorganic Solute Cotransporters AT4G00630 67.122 0.0 1438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02396 - - gmx:100818163 2148.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g02396 09 49289601 49302039 Gma09g02396 09 49289601 49302039 ECH
Gma18g02122 18 54916920 54931052 Gma09g02396 09 49289601 49302039 GST
Gma09g02396 09 49289601 49302039 Gma07g00673 07 6972986 6983889 PCT
Gma07g00673 07 6972986 6983889 Gma09g02396 09 49289601 49302039 PCT