Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02372 ATGGCTGTGGTGAGTCCTGTGCCTGCAACAACACAAAGGATGGGTTCAGTGAGGTTACTTTCTGATGCTGGTGGAGAAATTTTGGAGGAGCCAAATCCAAGGGTGGTTGATCAGCCAATCTATGTTGCTGTGACAAAAGAGGTGAAGGAGAGCAAATTAAATCTAATATGGGCAATACAGACCTCCGGAGGAAAGAGAATTTGCATTCTTTATGTTCATGTTCGTGCAACAATGATTCCCCTATTGGGAGGGAAATTCCCCGCAAGTACACTAAAAGAGGAGCAGGTTGAAGCATACTGGGAAGAAGAAAGGCAAGGCATGCATGGGATTCTGGATGAATATCTTTGTATCTGTCAGCGGATGGGGGTGCGAGCAGAGAAACTGCATATTGAAATGGATAGCATTGAAAAAGGAATTTTAGAACTCATCTCCCAGCATGGCATCCGAAAGCTTGTTATGGGAGCAGCATCTGATAAGTACTATAATAGGAGAATGATGGACCTCAAATCTAAGAAAGCCGTCTCTGTGTGTAAACAAGCTCCAGCTTCTTGTCATATACAGTTTGTCTGCAAAGGGCACCTTATACACACAAGGGATCGCAGTTCGGATGAAGGTAACGCAGAGGTTGCATCTCCTTTGGTGCAGCAAGTGCCAAACTCTTTGAAATCTTTGAGATCTCTGTCTATTACACTTGGGCAAGATTGCCAAGCAAATATAACCAATCCTGCTCTAGAGTTATTTCGCAGAGTAAGGTCTGCCAATGATGGACATGGAGCAAGCTTTATGGCTGTTTCTTCTCCAGAAGACACTGAAGGGCTTTCAACTCCACGTGACAGGATGGGTACAGAAGTAAGTTCTGATGAATCAGATAGGCTGTCTAGGATGAGTCCTTCTGGCTTGTCAACATGCTCTGACAGTGCAGTCGAACTAGCATTGACCCCAAGTTTGATAAACGAAAGCAGTGAGAATGCATTAGAGTTGACTTTGAGTCACCTGATTATAGAGGATCTTCATCATTCATCTCCTCCCAGTACACTGGATGGTGGAATGGATGATACTATCTACGACCAGCTTGAACAGGCTAGGGCTGAGGCTGAGAATGCTACACTAAATGCATATCAAGAAACTGTAAGGCGTATGAAAGCTGAAAAAGATGCATTTGAAGCTATACGCAAGATTAAAGCTTCTGAAAGCTTATATGCAGAGGAGTTGAACCAGAGGAAAATGGCAGAGGAAAAACTTAGGAAAGAAAAAGAAGAACTTGAGAATATGAAGAGCCTGAGAGACACAGTTAAGGAAGAACTCCGCCTTGCTCTTGATCAGAAGGCTTCACTAGAGAGTCAAATTGCGTCAACTGAACTTATGATAAAGGAGTTGGAGCAGAAGATTTTATCTGCTGTGGGTCTGTTACAAAGCTACAAGAATGAACGAGATGAATTGCAGATGCAGTGTGATAATGCATTGCGAGAGGCTGAAGAGTTGAGGAAAAAACAAGGAGAGGCTTCAGGCACCCATGTGCCTCAATTGTGCTCAGAATTCTCTTTTTCAGAGATTAAAGAAGCAACAAGTAACTTCAATCCATCCTCAAAGATTGGAGAAGGTGGATATGGAAGTATATTTAAAGGTGTCTTGCATCACACTGAGGTGGCTATAAAAATGTTAAACTCCGACAGCATGCAAGGACCCTTGGAGTTTCAACAGGAGGTTGATGTGTTGAGCAAGCTAAGGCATCCCAATCTTATCACACTCATAGGAGCCTGCCCAGATTCATGGGCTCTTGTCTATGAGTATTTACCTAATGGAAGCCTTGAAGATCGTCTTGCCTGCAAGGATAACACCCCTCCGTTGTCATGGCAAGCTCGAATTCGCATTGCTGCTGAACTATGCTCGGCTCTTATCTTTCTCCATTCCAGTAAACCTCACAGCGTAGTGCATGGTGACTTAAAACCCTCCAACATTCTCCTTGATGCAAACCTTATTAGCAAGCTTAGTGACTTTGGAATCTGTCGTATATTATCAAACTGTGAGAGTTCTGGTAGCAATACTACAGAGTTTTGGAGAACTGACCCAAAAGGAACTTTTGTCTACATGGATCCTGAATTCCTTGCCTCAGGGGAACTTACTCCAAAGTCAGATGTTTATTCATTTGGAATTATATTGTTGAGATTGTTGACTGGGAGACCAGCATTGGGAATAACAATGGAAGTGAAATATGCATTAGATACTGGAAAGTTGAAATCCCTATTGGATCCTTTGGCTGGAGACTGGCCATTTGTGCAGGCTGAACAGTTGGCTCGCTTGGCTTTGAGGTGCTGTGATATGAATAGAAAGAGCCGGCCGGATCTTTATTCAGATGTCTGGAGGATACTTGATGCAATGAGGGTTTCTTCTGGAGGTGCAAACTCCTTTGGATTAAGTTCTGAAGGGCTTTTACAATCTCCTTCATATTTTATTTGTCCAATCTTCCAGGAAGTCATGCGAGATCCACATGTAGCTGCAGATGGTTTTACTTATGAAGCTGAGGCTATACGAGGATGGCTTGACGGTGGTCATGACAATTCACCAATGACTAATAGTAAGCTGGCACATCACAATCTTGTTCCCAACCGCGCTCTTCGCTCTGCAATCCAGGACTGGCTTCAAAACCACTGA 2652 0.434 MAVVSPVPATTQRMGSVRLLSDAGGEILEEPNPRVVDQPIYVAVTKEVKESKLNLIWAIQTSGGKRICILYVHVRATMIPLLGGKFPASTLKEEQVEAYWEEERQGMHGILDEYLCICQRMGVRAEKLHIEMDSIEKGILELISQHGIRKLVMGAASDKYYNRRMMDLKSKKAVSVCKQAPASCHIQFVCKGHLIHTRDRSSDEGNAEVASPLVQQVPNSLKSLRSLSITLGQDCQANITNPALELFRRVRSANDGHGASFMAVSSPEDTEGLSTPRDRMGTEVSSDESDRLSRMSPSGLSTCSDSAVELALTPSLINESSENALELTLSHLIIEDLHHSSPPSTLDGGMDDTIYDQLEQARAEAENATLNAYQETVRRMKAEKDAFEAIRKIKASESLYAEELNQRKMAEEKLRKEKEELENMKSLRDTVKEELRLALDQKASLESQIASTELMIKELEQKILSAVGLLQSYKNERDELQMQCDNALREAEELRKKQGEASGTHVPQLCSEFSFSEIKEATSNFNPSSKIGEGGYGSIFKGVLHHTEVAIKMLNSDSMQGPLEFQQEVDVLSKLRHPNLITLIGACPDSWALVYEYLPNGSLEDRLACKDNTPPLSWQARIRIAAELCSALIFLHSSKPHSVVHGDLKPSNILLDANLISKLSDFGICRILSNCESSGSNTTEFWRTDPKGTFVYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITMEVKYALDTGKLKSLLDPLAGDWPFVQAEQLARLALRCCDMNRKSRPDLYSDVWRILDAMRVSSGGANSFGLSSEGLLQSPSYFICPIFQEVMRDPHVAADGFTYEAEAIRGWLDGGHDNSPMTNSKLAHHNLVPNRALRSAIQDWLQNH 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02372 883 ProSitePatterns Serine/Threonine protein kinases active-site signature. 643 655 IPR008271 GO:0004672|GO:0006468
Gma09g02372 883 Pfam Protein kinase domain 527 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g02372 883 PANTHER U-BOX KINASE FAMILY PROTEIN 31 882 - -
Gma09g02372 883 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 56 160 - -
Gma09g02372 883 SUPERFAMILY RING/U-box 807 882 - -
Gma09g02372 883 Coils Coil 355 390 - -
Gma09g02372 883 ProSiteProfiles U-box domain profile. 812 883 IPR003613 GO:0004842|GO:0016567
Gma09g02372 883 ProSitePatterns Protein kinases ATP-binding region signature. 531 552 IPR017441 GO:0005524
Gma09g02372 883 SMART Ubox_2 816 879 IPR003613 GO:0004842|GO:0016567
Gma09g02372 883 ProSiteProfiles Protein kinase domain profile. 525 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g02372 883 MobiDBLite consensus disorder prediction 272 290 - -
Gma09g02372 883 CDD STK_N 39 192 - -
Gma09g02372 883 Gene3D Phosphorylase Kinase; domain 1 495 597 - -
Gma09g02372 883 MobiDBLite consensus disorder prediction 259 300 - -
Gma09g02372 883 CDD RING-Ubox_WDSUB1_like 817 858 - -
Gma09g02372 883 Gene3D HUPs 39 184 IPR014729 -
Gma09g02372 883 Coils Coil 393 497 - -
Gma09g02372 883 Gene3D Transferase(Phosphotransferase) domain 1 598 801 - -
Gma09g02372 883 SMART serkin_6 525 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g02372 883 PANTHER OS02G0152300 PROTEIN 31 882 - -
Gma09g02372 883 SUPERFAMILY Protein kinase-like (PK-like) 505 783 IPR011009 -
Gma09g02372 883 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 812 883 IPR013083 -
Gma09g02372 883 Pfam U-box domain 814 883 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02372 Gma-Chr9 49067336 49073837 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g02372 349 883 U-box Gene Family AT2G45910 63.551 0.0 704
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Gma09g02372 Pkinase 3.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02372 - - gmx:100810508 1744.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g02372 09 49067336 49073837 Gma09g02372 09 49067336 49073837 ECH
Gma18g02151 18 55229389 55236897 Gma09g02372 09 49067336 49073837 ECH
Gma18g02151 18 55229389 55236897 Gma09g02372 09 49067336 49073837 GST
Gma09g02372 09 49067336 49073837 Gma07g00645 07 6628151 6635315 PCT
Gma07g00645 07 6628151 6635315 Gma09g02372 09 49067336 49073837 PCT