Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02346 ATGGCGAGGACGGAGGAAGAGAGAGTCGTGGGAAACGAGTCCTCGTCCGACGAGAAAAATGACCTGGTGGAGGAGATCCAACAGGTCATCGAATCGGTGGTTCAATTCGGCGACTACCGGAGGACGCAGAGGAAGGAAAGCCACAACCTCGTGCGCCGTTTCAAGCTCATGTTGCCGCTCTTGGAAGAGCTTCGTGACCTCCCACAACCCTTCCCCGAAATTGGCGTCGCTTGGTTAACCAAACTCAAGGACGCACTCTTGCTCGCCAAGGATTTGTTGAAACTATGCAGCCAAGGAAGCAAGATTCACCTCTCTTTGGAGACCGAGGCAGTTATGATCACGTTTCGGAAAGTGTATGAAAAATTAAGCCAAGCGTTTGATGGTGTGCCTTTTGATGAATTGGGTATCTCAGATGAAGTCAAAGAACAGCTTGACCTAATGCACGTGCAACTCAGGCGAGCCAGGAGAAGAACTGATACGCAGGACATAGAACTTGCAATGGATATGATGGTGGTGTTCTCTGATGATGATGACAGAAATGCTGATAGTGCTATCATTGAGAGGTTGGCTAAAAAATTGGAGCTTCATAGTGTTGAGGATCTCAATATAGAAACATTGGCTATTAGGAACCTTGCTGCAGAAAGAAAAGGGCAACAGACTGAGAGTACTCAGAAAATAATTGACCTTCTCAACAAATTCAAACGAATTGCAGGCATGGAAGAAACCAGCGTCCTTGATGATCCTGTCGTGTCCAAGATGCTTGAGAGGTGCACCTCTTTGGTCATCCCTCATGAGTTTCTCTGCCCAATTACACTAGAAATCATGACAGATCCTGTTATTGTAACAAGTGGGCAGGTAATCACATATTGTTCTTGA 876 0.4646 MARTEEERVVGNESSSDEKNDLVEEIQQVIESVVQFGDYRRTQRKESHNLVRRFKLMLPLLEELRDLPQPFPEIGVAWLTKLKDALLLAKDLLKLCSQGSKIHLSLETEAVMITFRKVYEKLSQAFDGVPFDELGISDEVKEQLDLMHVQLRRARRRTDTQDIELAMDMMVVFSDDDDRNADSAIIERLAKKLELHSVEDLNIETLAIRNLAAERKGQQTESTQKIIDLLNKFKRIAGMEETSVLDDPVVSKMLERCTSLVIPHEFLCPITLEIMTDPVIVTSGQVITYCS 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02346 291 MobiDBLite consensus disorder prediction 1 20 - -
Gma09g02346 291 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 256 290 IPR013083 -
Gma09g02346 291 Gene3D - 18 132 IPR036537 GO:0007166
Gma09g02346 291 Pfam U-box domain 262 287 IPR003613 GO:0004842|GO:0016567
Gma09g02346 291 PANTHER U BOX DOMAIN-CONTAINING 16 286 - -
Gma09g02346 291 SUPERFAMILY RING/U-box 261 286 - -
Gma09g02346 291 ProSiteProfiles U-box domain profile. 261 291 IPR003613 GO:0004842|GO:0016567
Gma09g02346 291 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 15 16 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02346 Gma-Chr9 48843398 48845716 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g02346 22 289 U-box Gene Family AT5G42340 52.612 1.53e-92 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02346 - - gmx:100777362 514.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02181 18 55523087 55526173 Gma09g02346 09 48843398 48845716 GST