Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02342 ATGTCAATCTTCGACGGAGCTTTCATGAACACGCAACTCTCCAAGCACACTTCGATCTTCGGCCTCCGTCTCTGGGTCGTGATCGGAATCCTCATTGGAGTCTTCATCGTCTTCACGCTCTTCCTCCTCTCCCTCTGCCTCGTCTCTCGCCGGAACCGCCGCCGCTCCGTCGCCGTCCCCGGCTACAAGGTCACCGGAGACGCCGACGCGGCGAAGGACATCCACACGATCGTGCACCTTCCCGGGCCCCACATGCTCCGGCCGGTGGCGCCGGAGATCCACGTGGAGATGGGGAAGAAGACGGAGCACCGGGTGGTGGTGCAGTGCGATGGGGTTTCGAGCGAGGAGAGTAAGGTGACGGTGGGGAGTGGGTGTGAAACGACGTCGTCTTTTGGAAGTGGGAGTGTTGGTGGGCTTGGGCTTGGGTCTGGACCTGGGCTTGGGcctgaggtttcacatctcggatgggggagatggtacactctgagggagcttgaggatgccactggaggattgagccctgaaaatgtggttggtgaaggtggctacggaattgtctatcatggagtactcaatgatggtaccaaaattgctgTCAAGAACCTCTTGAATAACAAGGGACAAGCTGAGAAAGAATTTAAAATAGAGGTAGAAGCAATTGGTCGAGTGCGACACAAAAATCTTGTTAGGCTGCTTGGATACTGTGTTGAGGGAGCCTACAGGATGCTTGTGTATGAGTATGTAGACAATGGCAATCTAGAGCAATGGCTGCATGGGGACGTTGGAGCTGTAAGCCCTTTGACATGGAACATACGGATGAACATTATATTGGGAACTGCAAGAGGATTGGCctatcttcatgagggtcttgaaccgaaagttgtccaccgagatgtgaaatcaagtaacatacttattgatcgccaatggaactccaaggtttccgattttggacttgctaagcttttgtgttctgAGAATAGTTACGTCACAACTCGAGTGATGGGGACATTTGGTTATGTTGCACCAGAATATGCATGCACTGGAATGCTGACTGAGAAGAGTGATATTTATAGCTTTGGGATACTTATCATGGAGATAATCACCGGAAGAAGTCCTGTTGATTATAGTAGACCGCAAGGAGAGGTTAATTTAATAGAATGGTTGAAGACTATGGTTGGGAATCGAAAATCCGAGGAAGTAGTTGATCCTAAGCTCCCTGAGATGCCATTTTCAAAGGCTCTTAAACGTGCTTTGTTGATTGCTCTTCGGTGTGTTGATCCTGATGCAACAAAGAGGCCAAAAATGGGACATGTGATACACATGCTTGAGGCAGACGACCTGTTATTCCATACTGAACAAAGAACTGAGGGAGAGTCTTCCCGTTCCTATCAAAGTGAGCACAAGGACTCAAATTTAGATAAGAGAACAGGTGGAGGTGTCATTGATAAAAGTGAAGATGCTAGTACTAGATGGAGATGA 1482 0.4042 MSIFDGAFMNTQLSKHTSIFGLRLWVVIGILIGVFIVFTLFLLSLCLVSRRNRRRSVAVPGYKVTGDADAAKDIHTIVHLPGPHMLRPVAPEIHVEMGKKTEHRVVVQCDGVSSEESKVTVGSGCETTSSFGSGSVGGLGLGSGPGLGPEVSHLGWGRWYTLRELEDATGGLSPENVVGEGGYGIVYHGVLNDGTKIAVKNLLNNKGQAEKEFKIEVEAIGRVRHKNLVRLLGYCVEGAYRMLVYEYVDNGNLEQWLHGDVGAVSPLTWNIRMNIILGTARGLAYLHEGLEPKVVHRDVKSSNILIDRQWNSKVSDFGLAKLLCSENSYVTTRVMGTFGYVAPEYACTGMLTEKSDIYSFGILIMEIITGRSPVDYSRPQGEVNLIEWLKTMVGNRKSEEVVDPKLPEMPFSKALKRALLIALRCVDPDATKRPKMGHVIHMLEADDLLFHTEQRTEGESSRSYQSEHKDSNLDKRTGGGVIDKSEDASTRWR 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02342 493 PANTHER OS01G0323000 PROTEIN 1 492 - -
Gma09g02342 493 Gene3D Phosphorylase Kinase; domain 1 156 247 - -
Gma09g02342 493 SUPERFAMILY Protein kinase-like (PK-like) 150 444 IPR011009 -
Gma09g02342 493 ProSitePatterns Serine/Threonine protein kinases active-site signature. 294 306 IPR008271 GO:0004672|GO:0006468
Gma09g02342 493 Gene3D Transferase(Phosphotransferase) domain 1 248 460 - -
Gma09g02342 493 SMART serkin_6 172 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g02342 493 PANTHER BRASSINOSTEROID INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 1 492 - -
Gma09g02342 493 Pfam Protein kinase domain 175 441 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g02342 493 ProSiteProfiles Protein kinase domain profile. 172 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g02342 493 MobiDBLite consensus disorder prediction 454 493 - -
Gma09g02342 493 ProSitePatterns Protein kinases ATP-binding region signature. 178 200 IPR017441 GO:0005524
Gma09g02342 493 CDD STKc_IRAK 178 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02342 Gma-Chr9 48800727 48804347 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g02342 105 467 Receptor kinase-like Gene Family AT4G02010 40.584 8.47e-92 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Gma09g02342 Pkinase 1.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02342 - - gmx:100800724 941.414
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g02342 09 48800727 48804347 Gma09g02342 09 48800727 48804347 ECH
Gma18g02186 18 55616125 55619870 Gma09g02342 09 48800727 48804347 GST
Gma09g02342 09 48800727 48804347 Gma07g00609 07 6261765 6265432 PCT
Gma09g02342 09 48800727 48804347 Gma16g00294 16 3116641 3120886 PCT
Gma07g00609 07 6261765 6265432 Gma09g02342 09 48800727 48804347 PCT
Gma16g00294 16 3116641 3120886 Gma09g02342 09 48800727 48804347 PCT