Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02338 ATGGTGTCCCTCAACCCAAACCCACCTCAAACTTTTCACTTCTTCGACCCCTTCCACATGGAGGATCAGAGTAAGAAGGTTCGAAAACCTTACACCATTACCAAGTCCAGAGAGAATTGGACTGACCAAGAGCATGACAAGTTTCTTGAAGCTCTTCACTTattcgaacgtgactggaagaagattgaagcatttgtaggttcaaaaacagttattagGAGTCATGCACAGAAATATTTCATGAAAATTCAGAAGAATGGCACAAGTGAACATGTACCTCCCCCTCGTCCAAAGAGAAAAGCTGCTCATCCATACCCACAAAAGGCTTCTAAAAATTCTCCTACTATATCCCAAGTTGCACGGCCATTCCAATCTTCATCTGCTTTATCTGAATCATCAAACATTTATAGGCCAGATTCATCATCTGTGCTTAGAACTCCAGTTAGCAGTGTACCATTACCATCTTGGGGTTATAATGTTGCACCACCGATCGATGATATGGTGGTAGTGATTCAACAAGCCAATCCTTTCAGTTACTGCTATAGCAGTAGTAATGAGAGCACTCCTAGGGGTTGGCCAAGTAGCAAAGAGAGTGATCAAGGAAAGTCAATTATAGTAATGCCAGATTTTGCACAAGTCTATAGATTCATTGGAAGTGTATTTGATCCAAATGCGACTAATCATCTACAGACACTGAAACAGATGAACCCAATAAATGTGAAAACTGTATTGCTATCGATGAGAAACCTCTCCACCAATTTGAGGAGTCCTGAATTTGAGAATGAGAGAAGGTTGCTGTCGTTGTACAATGCTAACTTGGAGAAGGGAAAATCTGGTAGTCATCATCGCAACCAACCCCTCAGTGACAGATCAGAGAGTGCCGTCTTATATGCTTAA 897 0.3913 MVSLNPNPPQTFHFFDPFHMEDQSKKVRKPYTITKSRENWTDQEHDKFLEALHLFERDWKKIEAFVGSKTVIRSHAQKYFMKIQKNGTSEHVPPPRPKRKAAHPYPQKASKNSPTISQVARPFQSSSALSESSNIYRPDSSSVLRTPVSSVPLPSWGYNVAPPIDDMVVVIQQANPFSYCYSSSNESTPRGWPSSKESDQGKSIIVMPDFAQVYRFIGSVFDPNATNHLQTLKQMNPINVKTVLLSMRNLSTNLRSPEFENERRLLSLYNANLEKGKSGSHHRNQPLSDRSESAVLYA 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02338 298 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 35 82 IPR006447 GO:0003677
Gma09g02338 298 SUPERFAMILY Homeodomain-like 31 85 IPR009057 -
Gma09g02338 298 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 84 IPR017930 -
Gma09g02338 298 Pfam Myb-like DNA-binding domain 37 79 IPR001005 -
Gma09g02338 298 MobiDBLite consensus disorder prediction 84 125 - -
Gma09g02338 298 MobiDBLite consensus disorder prediction 108 125 - -
Gma09g02338 298 Gene3D - 39 84 - -
Gma09g02338 298 SMART sant 36 82 IPR001005 -
Gma09g02338 298 CDD SANT 39 80 IPR001005 -
Gma09g02338 298 PANTHER MYB TRANSCRIPTION FACTOR 13 292 - -
Gma09g02338 298 MobiDBLite consensus disorder prediction 275 298 - -
Gma09g02338 298 ProSiteProfiles SANT domain profile. 35 88 IPR017884 -
Gma09g02338 298 PANTHER SWI/SNF COMPLEX-RELATED 13 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02338 Gma-Chr9 48761540 48765433 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma09g02338 Myb_DNA-binding 1.3e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02338 - - gmx:100791774 486.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02192 18 55667678 55673198 Gma09g02338 09 48761540 48765433 GST
Gma09g02338 09 48761540 48765433 Gma07g00606 07 6225473 6230840 PCT
Gma09g02338 09 48761540 48765433 Gma16g00293 16 3103871 3110116 PCT
Gma07g00606 07 6225473 6230840 Gma09g02338 09 48761540 48765433 PCT
Gma16g00293 16 3103871 3110116 Gma09g02338 09 48761540 48765433 PCT