Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02333 ATGGCGGAAGATTGGGATCTACATGCGGTGGTTAGAGGCTGCTCCACCGTTACATCATCGTCGGTGTCTTCCTCATCTTCTTCTTCCTCTGGCTTTGCCTCTTGTTACTTCCACCCTGAAGCTGCTGCTTCTTCTTCTTCCTCTTCCGGCTTCAACATCTTCAAGGGTGAACAAGGAATAAGCCAAGCTTTGTCGCTTTCTGCGTACCCTTTTGAGGCAAGGAGCTCCATTGAGGAGTTGCATGAGCTTTGCAAGCCTTTCTTCTCTAAATCTCAGCCTCTAACGTTGCAGGCCTCTTCACCCTTGTCCTCACTCTCTTCCTATTCCTCTGCTCCACCCAAGTCTGTTTCAACGCAAGAGAAACAACAACAGAGGAGTAAGCAGCCACATGCTGTCACCACCCCACGATCTAAAAGAAGAAAGAACCAGCTTAAGAAAGTTTGTCAAGTACCAGTTGAGAATCTCTCTTCAGACATATGGGCATGGAGGAAATATGGCCAGAAACCCATAAAGGGGTCTCCATATCCAAGGGGGTACTATAGATGTAGCAGCTCAAAGGGGTGTTTGGCAAGGAAACAGGTTGAAAGAAACAGATCAGACCCAACAATGTTCATAGTGACTTACACTGCTGAGCACAACCACCCTGCACCTACTCACAGAAACTCTCTTGCTGGTTCCACACGCCAGAAGCCATTGGCACCTCAAACAGCCACCACCACTGAAGAAGACTCTGAAAAGAGCAAGAGCTTCACAAAACCCACTTCCCCTGCCACCTCAGGGGCAGAGGAAGAGGCTCCAACACCACCACAAGGGGAAAAATCTGAGAGCAGAGAAGAGAAAGAGGATGTGATGGATGACGAGGAAGAAGATGAATTTGGCTTGTCTGATATGGTGCTTTCAGATGACTTCTTTGAAAGTTTGGATGAGCTGAGCCAACTCACTGCTCCTTCTGTTGTCACTGGAGACTGCTTCAGTGACCCCTTTTCTGCAATTGCAATCCCTTCTTGGGTGGCTAGTGGTGCTGCTACTGCTGGTGGATGTAGATGA 1047 0.4842 MAEDWDLHAVVRGCSTVTSSSVSSSSSSSSGFASCYFHPEAAASSSSSSGFNIFKGEQGISQALSLSAYPFEARSSIEELHELCKPFFSKSQPLTLQASSPLSSLSSYSSAPPKSVSTQEKQQQRSKQPHAVTTPRSKRRKNQLKKVCQVPVENLSSDIWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERNRSDPTMFIVTYTAEHNHPAPTHRNSLAGSTRQKPLAPQTATTTEEDSEKSKSFTKPTSPATSGAEEEAPTPPQGEKSESREEKEDVMDDEEEDEFGLSDMVLSDDFFESLDELSQLTAPSVVTGDCFSDPFSAIAIPSWVASGAATAGGCR 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02333 348 ProSiteProfiles WRKY domain profile. 151 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma09g02333 348 MobiDBLite consensus disorder prediction 105 146 - -
Gma09g02333 348 MobiDBLite consensus disorder prediction 211 296 - -
Gma09g02333 348 MobiDBLite consensus disorder prediction 281 296 - -
Gma09g02333 348 SMART WRKY_cls 156 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma09g02333 348 Pfam WRKY DNA -binding domain 158 215 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma09g02333 348 MobiDBLite consensus disorder prediction 214 240 - -
Gma09g02333 348 Gene3D WRKY domain 140 210 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma09g02333 348 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 338 IPR044810 GO:0003700
Gma09g02333 348 SUPERFAMILY WRKY DNA-binding domain 154 217 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma09g02333 348 MobiDBLite consensus disorder prediction 105 131 - -
Gma09g02333 348 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02333 Gma-Chr9 48691945 48693640 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g02333 1 346 WRKY Transcription Factor Family AT4G01250 45.763 4.12e-82 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma09g02333 WRKY 3.3e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02196 18 55762651 55764722 Gma09g02333 09 48691945 48693640 GST
Gma09g02333 09 48691945 48693640 Gma16g00288 16 3041246 3043246 PCT
Gma16g00288 16 3041246 3043246 Gma09g02333 09 48691945 48693640 PCT