Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02329 ATGGAAAGCCAAGACCCACCAAACCCACCACCCCAAAACAACCCTTTCATATTCACTCCTAATTCGATGTTGCAAAACCCTAATTGGGACCCTCAAGAGCAATCAGGGCTATGTGACATTGATTGGGGTAACCTTTTCTCTGCCCAAAACGGCTTATTGCTTAATGGGGATGCTAAAGATGCAATTGAATGTGCTTCTTCTTTTTCTTTTGTGGCTCAAAATAAGGGAGTTTGTGAGGAGGAAAAGGGAAACAAGGAGAAAAGGAAAGGTGGGAGGATGAAGAAAACAACACGAGTACCAAGGTTTGCGTTTCAAACGAGAAGTGCAGATGATATTTTGGATGATGGTTATCGCTGGAGGAAATATGGTCAGAAAGCTGTGAAGAATAGCACATATCCAAGAAGCTACTACCGCTGCACGCATCACACGTGCAATGTGAAGAAACAAGTTCAAAGGCTATCCAAAGACACAAGCATTGTGGTGACGACTTACGAGGGAATTCACAACCACCCGTGCGAGAAGCTCATGGAAACTCTAACCCCTCTTCTCAAGCAAATACAGTTTCTTGCTAGCTTGTAA 579 0.437 MESQDPPNPPPQNNPFIFTPNSMLQNPNWDPQEQSGLCDIDWGNLFSAQNGLLLNGDAKDAIECASSFSFVAQNKGVCEEEKGNKEKRKGGRMKKTTRVPRFAFQTRSADDILDDGYRWRKYGQKAVKNSTYPRSYYRCTHHTCNVKKQVQRLSKDTSIVVTTYEGIHNHPCEKLMETLTPLLKQIQFLASL 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02329 192 ProSiteProfiles WRKY domain profile. 108 173 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma09g02329 192 Gene3D WRKY domain 98 172 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma09g02329 192 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 23 188 IPR044810 GO:0003700
Gma09g02329 192 MobiDBLite consensus disorder prediction 1 16 - -
Gma09g02329 192 MobiDBLite consensus disorder prediction 17 32 - -
Gma09g02329 192 MobiDBLite consensus disorder prediction 1 32 - -
Gma09g02329 192 Pfam WRKY DNA -binding domain 114 171 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma09g02329 192 SUPERFAMILY WRKY DNA-binding domain 106 172 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma09g02329 192 SMART WRKY_cls 113 172 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma09g02329 192 PANTHER WRKY TRANSCRIPTION FACTOR 43-RELATED 23 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02329 Gma-Chr9 48670799 48672406 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g02329 86 192 WRKY Transcription Factor Family AT5G41570 72.897 2.10e-57 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma09g02329 WRKY 2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02329 - - gmx:100796481 369.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02200 18 55787616 55789532 Gma09g02329 09 48670799 48672406 GST
Gma09g02329 09 48670799 48672406 Gma16g00284 16 2971894 2974712 PCT
Gma16g00284 16 2971894 2974712 Gma09g02329 09 48670799 48672406 PCT