Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02321 ATGTCATCTTCTTCCATTCCCTCCTCCCCTGATCACTTCCCCCACCTCGGCCTCGGCTACTCCATCGCCATAGCCCTAGCCTTCCTCTTCCTCCTCTCCACCCTCCTCCTCTCCTCCTACCTCTGCTGccgccacaaccgccgtcgcctccgccacaccaccgccgccgccACCTCCGACGGGGGCATCGTCCTGCCACGTGTCATCTTCGTGGCGGAGGACGAGGACGAGGATGGCAGCGTGGCGGTGGGGTTCGACCAGAGCGTGATAAACTCGTATCCGAGGTTCCAGTTCAACAGGGACAACGCACGGAACAATAATATTATTAACACCACGTGCTCGATATGTTTGTGCGAGTACAAGGATTCGGAGATGCTGAGGATGATGCCGGAGTGTCGCCATTACTTCCACCTATGTTGTCTCGATTCGTGGCTGAAGCTCAATGGCTCTTGCCCCGTTTGCAGAAACTCGCCGCTTCCGACGCCGCTTTCTACGCCGCTGCAGGAGGTGGTGCCGCTCTCTCAGTATGCTGCTGATAGGAGAAGAAATAGGAATTAG 558 0.5161 MSSSSIPSSPDHFPHLGLGYSIAIALAFLFLLSTLLLSSYLCCRHNRRRLRHTTAAATSDGGIVLPRVIFVAEDEDEDGSVAVGFDQSVINSYPRFQFNRDNARNNNIINTTCSICLCEYKDSEMLRMMPECRHYFHLCCLDSWLKLNGSCPVCRNSPLPTPLSTPLQEVVPLSQYAADRRRNRN 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02321 185 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 72 159 IPR013083 -
Gma09g02321 185 PANTHER RING-H2 FINGER PROTEIN ATL67 3 182 IPR044289 GO:0016567|GO:0016740
Gma09g02321 185 SUPERFAMILY RING/U-box 91 160 - -
Gma09g02321 185 Pfam Ring finger domain 112 155 IPR001841 -
Gma09g02321 185 ProSiteProfiles Zinc finger RING-type profile. 113 155 IPR001841 -
Gma09g02321 185 SMART ring_2 113 154 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02321 Gma-Chr9 48613050 48614818 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g02321 1 174 C3H Transcription Factor Family AT5G07040 41.954 6.20e-37 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02321 - - gmx:100793332 297.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g02321 09 48613050 48614818 Gma09g02321 09 48613050 48614818 ECH
Gma18g02206 18 55856167 55856909 Gma09g02321 09 48613050 48614818 GST
Gma09g02321 09 48613050 48614818 Gma07g00583 07 5626211 5626783 PCT
Gma09g02321 09 48613050 48614818 Gma16g00278 16 2946016 2949930 PCT