Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02305 ATGGTTTCCCTTTCCACCACCCCTTTTCTCCCCTTCACTGCAAAAAACGCTTCTACTAGATTCCCACCTCCCAATTCATTCTCCCGCAACAAGCAACGTAGTAACAGGGATCACAGGAAGGTTGTCTGCGCCTGCATCGCACCTCCGCAGAACTTCAAGAGCCAGGACTCTTCCGCCATTAATTTCAATGGTTCGTCCAAATCAGAACAACTGAGCACGGCGTGGGATCATGAGGATGATTCTGATGTTCTTATTGAGTGTAGAGATGTGTATAAGTCTTTTGGGGAAAAGAAAATCTTAAATGGTGTCAGCTTCaagATTAGACATGGTGAAGCTGTTGGAATAATTGGTCCTTCTGGGACCGGCAAATCTACAGTTTTGAAGATTATTGCTGGACTTCTTGCTCCGGACAAAGGAGAAGTATATATTCGAGGTAAAAAGAGAGTTGGTTTAGTAAGTGATGATGACATATCTGGTCTTCGGATTGGATTGGTTTTCCAAAGTGCAGCACTCTTTGATTCTTTGACTGTTCGTGAAAATGTTGGTTTTCTCTTGTATGAACACTCAAGCATGTCTGAGGACCAGATATCAGAGCTTGTCACGGAAACCTTGGCTGCAGTTGGATTGAAGGGAGTTGAGGATCGGTTGCCTTCTGAGTTATCAGGTGGGATGAAAAAGCGAGTTGCTTTAGCTCGATCTATTATTTGTGACACCACAGAGGAATCAAAAGAGCCAGAGGCATCATTTTGCACTTCTGTACAGGTGCTCTTGTATGACGAACCAACTGCTGGACTTGATCCCATTGCATCTACTGTTGTTGAAGATCTGATTCGCTCTGTGCACATAAAAGGACGAGATGCACGTGGAAAACCTGGGAATATTGCATCTTATGTGGTTGTTACTCACCAACATAGTACCATTAAAAGAGCCATTGATAGATTGTTGTTTCTACACAAAGGAAAGATTGTTTGGGAAGGAATGACTCATGAATTTACAACTTCAACTAATCCAATTGTCCAGCAGTTTGCATCCGGGAGCCTAGATGGTCCTATCAGATATTAG 1062 0.4303 MVSLSTTPFLPFTAKNASTRFPPPNSFSRNKQRSNRDHRKVVCACIAPPQNFKSQDSSAINFNGSSKSEQLSTAWDHEDDSDVLIECRDVYKSFGEKKILNGVSFKIRHGEAVGIIGPSGTGKSTVLKIIAGLLAPDKGEVYIRGKKRVGLVSDDDISGLRIGLVFQSAALFDSLTVRENVGFLLYEHSSMSEDQISELVTETLAAVGLKGVEDRLPSELSGGMKKRVALARSIICDTTEESKEPEASFCTSVQVLLYDEPTAGLDPIASTVVEDLIRSVHIKGRDARGKPGNIASYVVVTHQHSTIKRAIDRLLFLHKGKIVWEGMTHEFTTSTNPIVQQFASGSLDGPIRY 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02305 353 PANTHER PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 3, CHLOROPLASTIC 31 353 - -
Gma09g02305 353 Pfam ABC transporter 100 237 IPR003439 GO:0005524
Gma09g02305 353 Gene3D - 72 345 IPR027417 -
Gma09g02305 353 MobiDBLite consensus disorder prediction 15 35 - -
Gma09g02305 353 MobiDBLite consensus disorder prediction 15 30 - -
Gma09g02305 353 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 85 344 IPR003439 GO:0005524
Gma09g02305 353 ProSitePatterns ABC transporters family signature. 220 234 IPR017871 GO:0005524
Gma09g02305 353 PANTHER PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 3, CHLOROPLASTIC 31 353 - -
Gma09g02305 353 CDD ABC_Org_Solvent_Resistant 85 342 - -
Gma09g02305 353 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 83 334 IPR027417 -
Gma09g02305 353 SMART AAA_5 109 321 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02305 Gma-Chr9 48508128 48512413 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g02305 91 337 Calmodulin-binding Proteins AT2G36910 26.718 2.83e-14 72.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02219 18 55972260 55978016 Gma09g02305 09 48508128 48512413 GST