Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02293 ATGGGAATGATAGTGGAGGTTGAAAACGAAAACGGAGACCTAAACGACGCCGTTCTTGTTCCACCCCCTAACTTCTCCATGGTCGAGGACTGCATTTTCCGATCCGGCCTCCCCAACCCTTCCAATTTCCCCTTTCTCCAAACCCTAAACCTTCGTTCCATCATATACCTGTGCCCTGAGCCTTATCCGGAAGAAAATCTGGACTTCCTTCGTTCGCAGAATATTCGCCTTTTTCAATTTGGAATTGAGGGGAAAACGGACATTTCTATGCCTATTCTCAAGGATTCTATCATGGATGCACTGGAAGTTTTAATTGATGTGAGAAATCACCCTGTTTTGATCCATTGCAAGCGAGGAAAGCATAGAACAGGTTGCCTTGTTGGTTGCTTGCGAAAATTACAGAACTGGTGTTTGTCCTCTGTGTTTGAGGAGTATCAACGATTTGCTGGTGCTAAATCCAGGACAATGGATTTAGCATTCATAGAAATGTTTGATGTTCTAAGCCTGAGTCAGTGCCTTTACAGCATCATCTACCAGTACCATGGTTCAAAGAAGCGTCGGTTGTTGTATAAAGATGAGAATTTACAGAAGCCCCGACTGACATCATTTTAG 612 0.4379 MGMIVEVENENGDLNDAVLVPPPNFSMVEDCIFRSGLPNPSNFPFLQTLNLRSIIYLCPEPYPEENLDFLRSQNIRLFQFGIEGKTDISMPILKDSIMDALEVLIDVRNHPVLIHCKRGKHRTGCLVGCLRKLQNWCLSSVFEEYQRFAGAKSRTMDLAFIEMFDVLSLSQCLYSIIYQYHGSKKRRLLYKDENLQKPRLTSF 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02293 203 ProSitePatterns Tyrosine specific protein phosphatases active site. 114 124 IPR016130 GO:0016311|GO:0016791
Gma09g02293 203 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 19 166 IPR029021 -
Gma09g02293 203 PRINTS Plant and fungal dual specificity phosphatase signature 19 36 IPR020428 GO:0016791
Gma09g02293 203 PRINTS Plant and fungal dual specificity phosphatase signature 56 69 IPR020428 GO:0016791
Gma09g02293 203 PRINTS Plant and fungal dual specificity phosphatase signature 75 89 IPR020428 GO:0016791
Gma09g02293 203 PRINTS Plant and fungal dual specificity phosphatase signature 92 106 IPR020428 GO:0016791
Gma09g02293 203 CDD PFA-DSP_Siw14 19 165 - -
Gma09g02293 203 Gene3D Protein tyrosine phosphatase superfamily 18 168 IPR029021 -
Gma09g02293 203 PANTHER TYROSINE-PROTEIN PHOSPHATASE DSP5 15 187 - -
Gma09g02293 203 PANTHER TYROSINE-PROTEIN PHOSPHATASE 15 187 - -
Gma09g02293 203 Pfam Tyrosine phosphatase family 19 166 IPR004861 -
Gma09g02293 203 ProSiteProfiles Dual specificity protein phosphatase domain profile. 24 175 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02293 Gma-Chr9 48418869 48421838 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g02293 1 199 Protein tyrosine phosphatase (PTP) family AT3G02800 68.159 1.41e-101 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02293 K18045 - gmx:100785746 417.927
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02231 18 56064530 56067616 Gma09g02293 09 48418869 48421838 GST