Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma09g02289 | ATGCCGGTTGACAACATGGGAGATAATGTTACTGTCTCGACCACTCAACACCACATTGCAATCCCCATTGAGAAATTGAATGCATCACTTGAAGCTGCAAAGGAAGAAAATTCTGTAACCGATGATGCCTATGTGGACAATGATGTCCAAAAATCTCAAGAGAAAGATGAAGAAACTGAAGAGAAGGGAGAATGTCGCTACTGTCAGGAAGAGGACTTAGTTTCTAATATGGAATCACCCTGCAATTGCAATGGTAGCGTCAAGTATGTTCACAGGAGATGCATTGATCAATGGTACAATTCCAAAGGCCGCATGATATTGTGTGAGATTTGCAGGAAGCCTTACAATCCAAATGATTACCCGCCACTTCCAGAACTTCATTCTGATAATGATGACACCGAGATAATTATATTAAGAGAGGAATGGACAATTCCTGGAACCAACACTCAAATTCGATCACCTCTGGTGCTGGCAGATCGTGCTACCAAGGGCCTCATTGATTCGATGAACAAAGACTTCAGCTTGAGAAACCCCACTGGTGGTGTGATATTTGGCATGTCACTCGTCATCTTTATCGCGGTGCTACTTATAAAGGATGCCTATGAATTTGCGCCACCCAAGGAGGAGAAATTTGCTCATTTTTTGTACAGTGCTGTGATGACTATCTCTGTGCCAGTTTACATTTTATCGTGGGTTTTACAATGCCAAGCCTATAGAAAAAGCGAGAGAGAGAGGGAAAGAGAAAGACAAAGAGATCGCAATGCATAG | 768 | 0.4245 | MPVDNMGDNVTVSTTQHHIAIPIEKLNASLEAAKEENSVTDDAYVDNDVQKSQEKDEETEEKGECRYCQEEDLVSNMESPCNCNGSVKYVHRRCIDQWYNSKGRMILCEICRKPYNPNDYPPLPELHSDNDDTEIIILREEWTIPGTNTQIRSPLVLADRATKGLIDSMNKDFSLRNPTGGVIFGMSLVIFIAVLLIKDAYEFAPPKEEKFAHFLYSAVMTISVPVYILSWVLQCQAYRKSERERERERQRDRNA | 255 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma09g02289 | 255 | ProSiteProfiles | Zinc finger RING-CH-type profile. | 57 | 118 | IPR011016 | GO:0008270 | |
Gma09g02289 | 255 | PANTHER | RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN | 6 | 242 | - | - | |
Gma09g02289 | 255 | Pfam | RING-variant domain | 65 | 111 | IPR011016 | GO:0008270 | |
Gma09g02289 | 255 | Coils | Coil | 23 | 43 | - | - | |
Gma09g02289 | 255 | SMART | ringv_2 | 64 | 112 | IPR011016 | GO:0008270 | |
Gma09g02289 | 255 | SUPERFAMILY | RING/U-box | 61 | 116 | - | - | |
Gma09g02289 | 255 | PANTHER | RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING | 6 | 242 | IPR033275 | - | |
Gma09g02289 | 255 | CDD | RING_CH-C4HC3_MARCH | 65 | 112 | - | - | |
Gma09g02289 | 255 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 48 | 120 | IPR013083 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma09g02289 | Gma-Chr9 | 48379143 | 48381398 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma09g02289 | 54 | 115 | C3H Transcription Factor Family | AT2G22120 | 40.299 | 4.37e-07 | 48.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma09g02289 | - | - | gmx:102670090 | 480.33 |