Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02261 ATGGAGGATTCATTGGAGAATTGGATTTCACAGTTGGAAATGGAGGAATATGATGATGTGTTGAATGAAAGTCATCATGGCTCATTTGATGAGCAAGAGTTCCTAAGAGAGATCCTTGAGGAGCAGCCAGAAAACTTGTCACCTCAAAGAGAAAACATCTGCAGCACCAGCCCCACCAACAGCACTGTGTCCTTTGATGAGGCAATTAGCTTTAATTATGCGAGTGGCAGCACTCTCCACAAAAGCAACAGCTCCAACTCCATCAAGTCTTTGAAAAGATCATCATCATCAAGTGTCTCACCAGCCTCCACCACCACATACCTTCTCTCTTTTGATACCTCAATTGTTGAACCAATCACACTTAAACCTTCCCCTAAGCTTGATGTGGTGAAAGATGGGTCTGAGTTTGATGCATTGATGCCCCAAACCCAACCAAAGAAGAAGGTTAGAAGGTCATGTGAGACACGGCATCACATAATTGCTGAGAGGAAAAGGAGGCAGGAACTGACAGGGAGCATTATAGCACTTTCAGCAACTATTCCTGGGCTCAAGAAGATGGACAAGGCTTATGTGCTTCGTGAAGCTGTCAATTACACAAAACAACTTCAAGAGCGAGTTAAAGAGTTGGAAAATCAAAACAAAGTAGATTCAGCAACATTCATAAGGAAATCTGAAGCCTCCTCAGATAAAAACACCGGCAATTGTGAAACGAACAAAGAAATATCACTATTTGAGGTTGAAGCAAGAGTCCTAGATAAGGAAGTACTCATTGGAATCCATTGTGAGAAGCAAAAGGACATAGTGTTCAAAATACATGCCTTGCTTAGAAACCTCCATCTATCTACAACCAGTAGCACCGTATTGCCATTTGGGACTTCTACTCTTATAATCAACATTATTGCTCAGATGAATGGCGAATACAGCATGACCAAGGATGACCTAGTGAAAAAACTTAGAGAATATCTGTTGGAGGTGTATGACATGCAATAG 990 0.4162 MEDSLENWISQLEMEEYDDVLNESHHGSFDEQEFLREILEEQPENLSPQRENICSTSPTNSTVSFDEAISFNYASGSTLHKSNSSNSIKSLKRSSSSSVSPASTTTYLLSFDTSIVEPITLKPSPKLDVVKDGSEFDALMPQTQPKKKVRRSCETRHHIIAERKRRQELTGSIIALSATIPGLKKMDKAYVLREAVNYTKQLQERVKELENQNKVDSATFIRKSEASSDKNTGNCETNKEISLFEVEARVLDKEVLIGIHCEKQKDIVFKIHALLRNLHLSTTSSTVLPFGTSTLIINIIAQMNGEYSMTKDDLVKKLREYLLEVYDMQ 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02261 329 MobiDBLite consensus disorder prediction 79 102 - -
Gma09g02261 329 Gene3D - 142 216 IPR036638 GO:0046983
Gma09g02261 329 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 153 202 IPR011598 GO:0046983
Gma09g02261 329 Pfam Helix-loop-helix DNA-binding domain 156 203 IPR011598 GO:0046983
Gma09g02261 329 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 156 215 IPR036638 GO:0046983
Gma09g02261 329 PANTHER BHLH TRANSCRIPTION FACTOR 4 328 - -
Gma09g02261 329 SMART finulus 159 208 IPR011598 GO:0046983
Gma09g02261 329 Coils Coil 192 219 - -
Gma09g02261 329 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 4 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02261 Gma-Chr9 48129673 48132387 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g02261 150 322 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 46.961 6.42e-39 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma09g02261 HLH 1.3e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02261 - - gmx:100818334 611.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02270 18 56405718 56410009 Gma09g02261 09 48129673 48132387 GST