Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02248 ATGGCCGGCATAGACTTGGGTTCAGCATCACATTTTGTTCATCATCGCCTTCAACGCCCTGACCTTGAAGACGATGAGAACCAACAAGACCAAGACAACAACCTTAACGATCACGAAGGGCTTGACCTAATTACACCAAATCCAGGTCCTGGTGATGTTGTTGGTCGCAGGCCAAGAGGAAGACCCCCAGGTTCAAAGAACAAGCCAAAACCACCAGTTATCATCACAAGAGAGAGTGCAAACACCCTTAGGGCTCACATCCTTGAAGTTAGTACTGGTTGTGACGTCTTTGAATCGGTCGCTACCTATGCAAGGAAGCGGCAAAGAGGGATATGTGTCCTCAGTGGGAGTGGCACCGTGACCAACGTGACATTGAGGCAGCCGGCCGCGGCTGGTGCCGTCGTCACGCTGCACGGAAGGTTTGAGATCCTCTCTTTGTCAGGATCATTCCTCCCACCTCCAGCTCCACCAGGTGCTACAAGTTTGACTGTGTTCCTTGGTGGAGGACAGGGTCAAGTGGTGGGAGGAAATGTTGTTGGTCCTTTGGTGGCTTCTGGGCCTGTTATTGTTATTGCTTCATCTTTTACTAATGTAGCATATGAGAGGTTGCCTTTGGATGAAGATGAATCTATGCAGATGCAACAAGGGCAATCATCAGCTGGTGATGGTAGCGGTGACCATGGTGGTGGAGTTAGTAATAACTCTTTTCCGGATCCGTCTTCCGGGCTTCCATTCTTCAATTTGCCACTAAACATGCCTCAGTTACCTGTTGATGGTTGGGCTGGCAACTCTGGTGGAAGGCAATCTTACTGA 813 0.4982 MAGIDLGSASHFVHHRLQRPDLEDDENQQDQDNNLNDHEGLDLITPNPGPGDVVGRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVSTGCDVFESVATYARKRQRGICVLSGSGTVTNVTLRQPAAAGAVVTLHGRFEILSLSGSFLPPPAPPGATSLTVFLGGGQGQVVGGNVVGPLVASGPVIVIASSFTNVAYERLPLDEDESMQMQQGQSSAGDGSGDHGGGVSNNSFPDPSSGLPFFNLPLNMPQLPVDGWAGNSGGRQSY 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02248 270 SUPERFAMILY AF0104/ALDC/Ptd012-like 80 213 - -
Gma09g02248 270 Gene3D - 83 217 - -
Gma09g02248 270 PIRSF ESCAROLA 3 266 IPR014476 GO:0003680
Gma09g02248 270 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 3 270 IPR014476 GO:0003680
Gma09g02248 270 MobiDBLite consensus disorder prediction 17 74 - -
Gma09g02248 270 CDD DUF296 84 159 IPR005175 -
Gma09g02248 270 Pfam Plants and Prokaryotes Conserved (PCC) domain 84 197 IPR005175 -
Gma09g02248 270 MobiDBLite consensus disorder prediction 209 242 - -
Gma09g02248 270 MobiDBLite consensus disorder prediction 210 241 - -
Gma09g02248 270 ProSiteProfiles PPC domain profile profile. 80 217 IPR005175 -
Gma09g02248 270 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 3 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02248 Gma-Chr9 48060091 48061516 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g02248 1 267 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 64.120 1.64e-98 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02248 - - gmx:100814613 433.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02281 18 56501837 56503254 Gma09g02248 09 48060091 48061516 GST