Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02245 atgggTCGTCGCCAAAACGACTCAGATTTCGGTAGATTCGCGATTCTCGTCCTCTTCTTGATAGGCGCAATCTCCTGCTCCGTGATCTACCTTTTCCTTACGGTGGTCTTCAGTCCCAGCCCTGAATCTCTTCCTTCAGTGGATGATCATGTGGTGGGGGTTGCAGAAGAGGAGCAATGCTGCAGAGGGATTGAACATTTGGAGCTTTGGGGTGATGCTGTGAAATGGGGCTCTGAATTTAGGTTGAATTCCTCGGAGGAATGTTGCATGGCTTGTAAGCGAATGTGTAGCGGTGATGGAGGACCTTGTATGTGTAATTCCTGGGTGTATTGTGGAGATAGAGAGGCTTGTGGACCTAGATTTGGTGAGTGTTGGTTAAAAAAACAAAAGGATGCCTTAAATCCTGATCGACGAGACTCCGGAGATCTAGTTATGTGGACTTCTGGGTTTGTCTTTGATAAGGAAGAGGGAACTGTTGGTATGGAAACTGACCATGGAATTCTTCGAATAAAACTTTTGCCTGAATGTGCTCCATATTCTGTTTCCTACATCCTTGAGCTGTTGGCGTTGCCTCATTGTGTTGGTTGCCATATTCATCGTGCTGAAAGCCGAGGAAGCTTTTGGGATACAGAAGGAAACCACATAAAAAAGACTCCATATGGTCCTCCTTTCGCACTTATTCAAGGAACATTGGAATCCTATGGGTCTATGTTCAAGGATATTCCAGAAGAGCACTGTCCTACCATAAGAAGAGGATCTGTTGCATGGGTTGGTTCTGGTCCAGAATTCTTTATCAGCCTCGCCGATCACGCAGAATGGAGAAATGCATACACTGTGTTTGGCTCTGTTCTATCTGAAGATATGGAAATTTTAGAGAAAATTGCTCAGCTTCCAACTAAATCAGAAATTTGGAATAATATTAAAGAAACCTCCGCCCTCATCGACGCCTACCGCGACAAATGGTACTCCCTCGGCCGCACCAACCTCAAGGCCACCCATTGGCAAGAGGTGGCCGACTCCGTCACGGCGCAGTGCCCCAACGCCTCCCCCACGGCCAAAACCCCCGTGCAGTGCCGCCACAAGATGGAGAAGCTCCGCAAACGGTACCGCACCGAAATCCAACGCCTCCGCAACCTCCCCCTTCCCCGCCTCAACAACGCCAGCACCAATTCCCCTTCCTCCTGGCTCCACTTCAAATCCATGGACTCCATGGAAAAAGGCCCCAACCACAAACCTCACGCCGACAACAACCTTaacatcaacaacaatttccacgatgacgacgtcgacgacgacgatctgtacgaggaATTCAAAAACGCCCCCGGATCCAACACCAGGAGCCTCAACAAGCTCTACAAGAACAACAACGGATTCAATTCGGCTGGTTCGGGCTCCGGATCCGGATTTCGGATCCGGATCCCGGCCGGCGTGCCACAACAACAACACCATACGGCGTCGTCAAATAAGATTTTTAACAGCCATCCTCCTCCCGGGATGGGGCCACGTGGCGGGGGCGTGAAGAGGGAGCGCGAGAGGGACGCGGTGGCGGAGATGGTGGGGGCTATTAAGGTCCTTCGCGACGGGTTCGTGAGGATGGAGCAGATGAAGATGGAGATGGCCAGGGAGATCGAGAGCATGCGGATGGAGATGGAGATGAAGCGCACCGAGATGATCCTGGACTCGCAGCAGAGGATTGTGGAGGCTTTTGCTAGGGCCGTTTCGCAGAAGAGGACCAAGGGCAAGTCCACGCCCTCGCCTTCATCGCAACCGTAG 1776 0.4972 MGRRQNDSDFGRFAILVLFLIGAISCSVIYLFLTVVFSPSPESLPSVDDHVVGVAEEEQCCRGIEHLELWGDAVKWGSEFRLNSSEECCMACKRMCSGDGGPCMCNSWVYCGDREACGPRFGECWLKKQKDALNPDRRDSGDLVMWTSGFVFDKEEGTVGMETDHGILRIKLLPECAPYSVSYILELLALPHCVGCHIHRAESRGSFWDTEGNHIKKTPYGPPFALIQGTLESYGSMFKDIPEEHCPTIRRGSVAWVGSGPEFFISLADHAEWRNAYTVFGSVLSEDMEILEKIAQLPTKSEIWNNIKETSALIDAYRDKWYSLGRTNLKATHWQEVADSVTAQCPNASPTAKTPVQCRHKMEKLRKRYRTEIQRLRNLPLPRLNNASTNSPSSWLHFKSMDSMEKGPNHKPHADNNLNINNNFHDDDVDDDDLYEEFKNAPGSNTRSLNKLYKNNNGFNSAGSGSGSGFRIRIPAGVPQQQHHTASSNKIFNSHPPPGMGPRGGGVKRERERDAVAEMVGAIKVLRDGFVRMEQMKMEMAREIESMRMEMEMKRTEMILDSQQRIVEAFARAVSQKRTKGKSTPSPSSQP 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02245 591 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 309 - -
Gma09g02245 591 MobiDBLite consensus disorder prediction 487 507 - -
Gma09g02245 591 Pfam Myb/SANT-like DNA-binding domain 307 404 IPR044822 -
Gma09g02245 591 Gene3D - 309 371 - -
Gma09g02245 591 Coils Coil 359 379 - -
Gma09g02245 591 SUPERFAMILY Cyclophilin-like 154 301 IPR029000 -
Gma09g02245 591 SMART 118neu2 312 409 IPR006578 -
Gma09g02245 591 Gene3D - 147 308 IPR029000 -
Gma09g02245 591 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 159 305 IPR002130 GO:0000413|GO:0003755
Gma09g02245 591 Coils Coil 537 557 - -
Gma09g02245 591 PANTHER EXPRESSED PROTEIN 1 309 - -
Gma09g02245 591 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02245 Gma-Chr9 48013131 48021256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g02245 310 404 Trihelix Transcription Factor Family AT3G14180 30.526 3.11e-09 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gma09g02245 Pro_isomerase 1.7e-11 CL0475
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02245 - - gmx:100811921 657.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02286 18 56574179 56575845 Gma09g02245 09 48013131 48021256 GST