Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02235 ATGGGTCCCATTGTCTCGAACCTTTTGTACCCTTCACTTTATAAGTTTCTTTCGTTCTCACATCTCATTTATTTCACCTCCCCTCGGTGGGTTAGGTTTGCAATGGAGATGGAATGGAATGTCTTTCAACGGGTGAAACTTGGTTGGGATCCAGGGGCTGAAGCTGCCCACGACCAGGAACGCGCACATGCTGAACACGCGCGTGGACAAGCTGCATACGAAAGTTCTGTTCATGCAAGAGTTGGGGTTTTTGAAATGGAGAGAGATTTGGAGGAGCTGAATAGGTTTCCTCAATACTTTGGGTTCAGTTTGAAGGAGAGGATTGTGCCAAGGCACTTGCATTTGAAGGAGAGGGGTGTTAGGATTCCCTTAAACAGAATGTTGATGTGGGGTAATGAAAAGTTCTACGCCAAGTGGAAGTAA 423 0.4634 MGPIVSNLLYPSLYKFLSFSHLIYFTSPRWVRFAMEMEWNVFQRVKLGWDPGAEAAHDQERAHAEHARGQAAYESSVHARVGVFEMERDLEELNRFPQYFGFSLKERIVPRHLHLKERGVRIPLNRMLMWGNEKFYAKWK 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02235 140 PANTHER TRANSCRIPTION TERMINATION FACTOR MTEF1, CHLOROPLASTIC 84 140 - -
Gma09g02235 140 Gene3D Transcription termination factor 3, mitochondrial 76 140 IPR038538 -
Gma09g02235 140 SMART mt_12 90 121 IPR003690 GO:0003690|GO:0006355
Gma09g02235 140 PANTHER CGI-12 PROTEIN-RELATED 84 140 IPR003690 GO:0003690|GO:0006355
Gma09g02235 140 Pfam mTERF 84 135 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02235 Gma-Chr9 47956508 47957419 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gma09g02235 mTERF 4.5e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02235 K15032 - gmx:121172859 122.864
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02297 18 56647328 56649015 Gma09g02235 09 47956508 47957419 GST