Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02225 ATGGAGAGGGTTGCAGAGCCAAAGGTACTTCCTCGGTCCTTGCCTGTTCTAGTTGAGGTATCCAATGCACACACGGATGCAATAAGGGAAGCTGGTCAAAGACTAAATGGGCAGGATGTTTCGAGTGTGCGTGGAATTCCAGGAAGGGAAGGGAATCAGTTTTTGAAAGCGCGGGATGGCCCTATGAAACGTCTGGCCTCCATCAGAGAAGTGGCCCAGTTATCAAATGCACGAATAGTTTTGGTAAGAGAGGATATGGGATTCGATACACGCTGTCAAGAGCCTCCCTCCCCTGCGCCTACAAGAATGTGGAAAGGAAAGGGCTCTTTACCGGAAGCTGTAGAACTTGTGCCTGATATTGAGAAATTGAAGGGTGGCAATGATTCTTTTGTGGAAACTGGTCCAAGTTCATTTGCAGGTGCTAGTCATCCCCCAGAACCTGTTGATACTGATCTTATGAGAACGGTTTTTGTACCAATAGGTCAAACTAAATCTGAAGCTGGATGCTTACTGAAGAGTGTGTCCTTGAAGGGTCCTTTCTTAGAAGATCTTTCAATTCATGTTCCTGCAAAGAAACCAAGCCTGGCTGTTGTTTCTCCTGCAGAAAGCATGGTTGAAGAATCAAATGAGATGGGTAACTTATCTTCGCCATTTTTAGGAGCTCGTGCATCACAGAATACTGAGAACTCTCCCCTTGCCCCAGATTCTGAGGAGAAAGAATGTGTTTGGGATGCCTCATTGCCTCCAAGTGGCAATGTCAGCCCTCATAGCAGTATTGACAGTACTAGTGTTGTCAGAACAATGAGCATTGCTAATAGTTGTGCAAGTACATATCGAAGTGATGCAGTCACTAGCGATGGCATGCTTAGTTTGGACAGGAATTGTGATAGCACTAAAGGAAGTGTAAGAGGGGATTCACTTGAGAGTGCAAAAACTAGTGCTAGTCGAGCAAGTGACAGCAGTGGCCTCAGTGATGACAGCAACTGGAGTAACATTACTGGCAGTGCCAACAAGCCCCACAAAGGAAATGATCCTAGGTGGAAGGCTATCCTTGCCATCCGAACACGGGATGGAATTTTGGGCATGAGTCATTTTAGGTTACTCAAACGGCTTGGTTGTGGTGATATTGGAAGTGTATATCTCTCAGAGTTGAGTGCAACTCGGTGCTTTTTTGCAATGAAAGTTATGGACAAGGCATCCTTAGCAAGCAGAAATAAGCTGACTAGAGCACAGACAGAAAGAGAGATATTGCAGTTGCTTGACCATCCATTTCTGCCTACTTTGTATACACATTTTGAAACTGACAGATTCTGCTGTTTGGTGATGGAATACTGTCCAGGGGGTGATCTACACACTTTAAGGCAAAGGCAACCTGGGAAACATTTCTCAGAGTATGCTGCACGCTTTTATGCTGCAGAGGTCCTGTTGGCACTTGAATATCTTCACATGCTTGGAGTTGTGTATCGAGACCTTAAACCTGAAAACGTACTGGTCCGAGATGATGGTCACATAATGCTCTCAGACTTCGATCTTTCTCTCCGATGTGCTGTTTCACCTACCCTTATTAGAAATTTTGACAGTGACCCCTCAAAACGAGGTGGTGGTGCATTCTGTGTCCAGCCAGCATGTATCGAGCCTTCATCAGTATGCATCCAGCCTTCATGTTTCATGCCCCGGCTCTTTGCTCAGAAAAATAAGAAATCACGAACGCCTAAAGCAGAACCTGGCATGCCGTCCAGCACGCTTCCTGAGCTTGTTGCCGAACCAACAACAGCTCGGTCAATGTCTTTCGTTGGCACTCACGAATACCTTGCCCCTGAAATCATCAAAGGAGAAGGTCATGGAAGTGCAGTTGATTGGTGGACATTTGGAATTTTCTTGCACGAGTTACTATATGGTAAAACTCCTTTCAAAGGATCAGGAAACCGTGCAACACTGTTCAACGTAGTAGGCCAGCAGCTCAGATTTCCTGAATCTCCGGCCACGAGTTATGCCAGCCGTGATCTGATCCGGGGCTTGCTGGTGAAGGAGCCGCAGCACCGACTTGGGGTGAAGAGGGGCGCGACCGAGATCAAACAACACCCCTTCTTTGAAGGCGTGAACTGGGCGTTGATTAGGTGCAGCACACCACCTGAAGTTCCAAGACCAGTTGAATGTGATCTACCAGCAAAGTTTGAACCAGTTGATACTGTTGGGGTTGGCAACATCAACAATAGCAACAATAGTAGTAAGAGGATGGTGGGTAATAATAATACTGACATGAAGTCTGGGGGTAAATATCTGGACTTTGAGTTCTTTTAA 2301 0.4615 MERVAEPKVLPRSLPVLVEVSNAHTDAIREAGQRLNGQDVSSVRGIPGREGNQFLKARDGPMKRLASIREVAQLSNARIVLVREDMGFDTRCQEPPSPAPTRMWKGKGSLPEAVELVPDIEKLKGGNDSFVETGPSSFAGASHPPEPVDTDLMRTVFVPIGQTKSEAGCLLKSVSLKGPFLEDLSIHVPAKKPSLAVVSPAESMVEESNEMGNLSSPFLGARASQNTENSPLAPDSEEKECVWDASLPPSGNVSPHSSIDSTSVVRTMSIANSCASTYRSDAVTSDGMLSLDRNCDSTKGSVRGDSLESAKTSASRASDSSGLSDDSNWSNITGSANKPHKGNDPRWKAILAIRTRDGILGMSHFRLLKRLGCGDIGSVYLSELSATRCFFAMKVMDKASLASRNKLTRAQTEREILQLLDHPFLPTLYTHFETDRFCCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIRNFDSDPSKRGGGAFCVQPACIEPSSVCIQPSCFMPRLFAQKNKKSRTPKAEPGMPSSTLPELVAEPTTARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFPESPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPVECDLPAKFEPVDTVGVGNINNSNNSSKRMVGNNNTDMKSGGKYLDFEFF 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02225 766 MobiDBLite consensus disorder prediction 290 338 - -
Gma09g02225 766 Gene3D Phosphorylase Kinase; domain 1 363 448 - -
Gma09g02225 766 SUPERFAMILY Protein kinase-like (PK-like) 347 719 IPR011009 -
Gma09g02225 766 MobiDBLite consensus disorder prediction 215 232 - -
Gma09g02225 766 ProSiteProfiles Protein kinase domain profile. 365 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g02225 766 Pfam Protein kinase domain 594 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g02225 766 Pfam Protein kinase domain 366 515 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g02225 766 Gene3D Transferase(Phosphotransferase) domain 1 593 714 - -
Gma09g02225 766 PANTHER FLIPPASE KINASE 1-RELATED 76 766 - -
Gma09g02225 766 MobiDBLite consensus disorder prediction 732 751 - -
Gma09g02225 766 CDD STKc_phototropin_like 363 716 - -
Gma09g02225 766 ProSitePatterns Serine/Threonine protein kinases active-site signature. 486 498 IPR008271 GO:0004672|GO:0006468
Gma09g02225 766 SMART serkin_6 365 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma09g02225 766 Gene3D Transferase(Phosphotransferase) domain 1 449 515 - -
Gma09g02225 766 MobiDBLite consensus disorder prediction 215 240 - -
Gma09g02225 766 MobiDBLite consensus disorder prediction 289 342 - -
Gma09g02225 766 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 76 766 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02225 Gma-Chr9 47790676 47795534 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g02225 1 766 AGC Kinase Gene Family AT2G44830 65.668 0.0 944
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Gma09g02225 Pkinase 8.8e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02225 - - gmx:100800019 1509.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g02225 09 47790676 47795534 Gma09g02225 09 47790676 47795534 ECH
Gma18g02309 18 56903496 56907078 Gma09g02225 09 47790676 47795534 GST
Gma03g01042 03 34935661 34940035 Gma09g02225 09 47790676 47795534 PCT
Gma07g01041 07 12303163 12307463 Gma09g02225 09 47790676 47795534 PCT