Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02205 ATGGCAAGAAGTGCAAATAAGGTTACCTTTATCTTCTTGGTTGCTTTTGCCATTACTATTCCATGCCTTGAGGCGGGCATTGCTGAGTTTGACGATTTTCTGAAAGCACAAGCTAGTGAGGCCCAAGTGATCGCTCTTAAATCCTACCAACCTGACCCTATAAACGTTACAGCCGAGTTCAATATCCATGTTCATAGGGCATTAATGGAGGAAGAAAATGATACAAGGAGGGAACTAAAGCAGAAATACCATGGACCATGCATGGCCACGAATCCAATCGATAGTTGTTGGCGGTGTAGGAAACATTGGGCACAAGACCGTTTTAGGGAAACCGGTTCATCGCGCCCAACAACAACGCTGCAAAGGAAATCCCACAGGCACTATGCTTCACCTGAAGTGTGGAGCAAATGGCAGTGGAAATCAGAGAACGACCTCTTCATAAATGGGGCTACTTTTCTTCAGTCAGGAGCACCTCTTGGGAAGCTTCCTTTCAACAAAGGGCTCATGATGAAACCTAGACCTGGGGCAGAAGCCAGCAGGCTCACACGCTTTGCTGGTACCCTAAATTGCAAGCTGGGTAAGCCTTGCTAA 591 0.4687 MARSANKVTFIFLVAFAITIPCLEAGIAEFDDFLKAQASEAQVIALKSYQPDPINVTAEFNIHVHRALMEEENDTRRELKQKYHGPCMATNPIDSCWRCRKHWAQDRFRETGSSRPTTTLQRKSHRHYASPEVWSKWQWKSENDLFINGATFLQSGAPLGKLPFNKGLMMKPRPGAEASRLTRFAGTLNCKLGKPC 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02205 196 Coils Coil 62 82 - -
Gma09g02205 196 PRINTS Pollen allergen Amb family signature 137 161 IPR018082 -
Gma09g02205 196 PRINTS Pollen allergen Amb family signature 167 190 IPR018082 -
Gma09g02205 196 Pfam Pectate lyase, N terminus 27 79 IPR007524 GO:0030570
Gma09g02205 196 Gene3D - 107 189 IPR012334 -
Gma09g02205 196 PANTHER PECTATE LYASE 5 110 - -
Gma09g02205 196 PANTHER PECTATE LYASE 123 196 - -
Gma09g02205 196 PANTHER PECTATE LYASE 18-RELATED 123 196 IPR045032 GO:0030570
Gma09g02205 196 PANTHER PECTATE LYASE 18-RELATED 5 110 IPR045032 GO:0030570
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02205 Gma-Chr9 47553116 47554648 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g02205 116 196 Polysaccharide Lyase AT1G14420 37.209 1.57e-13 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02205 K01728 - gmx:102664159 411.764