Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02192 ATGGTGCAGAGGCTCACTTATCGCAAGCGGCATAGTTATGCTACCAAATCCAACCAGCACCGGGTTGTTAAGACCCCTGGAGGGAAGTTGGTGTACCAGACCACTAAGAAGAGAGCAAGTGGACCTAAGTGCCCTGTCACTGGCAAGAGGATCCAAGGGATTCCACACTTGAGACCTGCTGAATACAAGAGGTCTAGATTGCCTCGGAACCGCAGGACCGTAAACCGAGCCTACGGAGGTGTTTTATCAGGAGGAGCTGTTAGAGAAAGGATTATTCGTGCTTTCCTGGTTGAAGAGCAAAAAATTGTGAAAAAGGTATTGAAGATCCAGAAGGCAAAAGAAAAGCAGGCATCAAAGAGTTAA 363 0.4766 MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLPRNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKQASKS 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02192 120 PRINTS Ribosomal protein L34 signature 13 26 IPR008195 GO:0003735|GO:0005840|GO:0006412
Gma09g02192 120 PRINTS Ribosomal protein L34 signature 26 43 IPR008195 GO:0003735|GO:0005840|GO:0006412
Gma09g02192 120 PRINTS Ribosomal protein L34 signature 44 54 IPR008195 GO:0003735|GO:0005840|GO:0006412
Gma09g02192 120 PRINTS Ribosomal protein L34 signature 66 88 IPR008195 GO:0003735|GO:0005840|GO:0006412
Gma09g02192 120 PANTHER - 1 120 - -
Gma09g02192 120 PANTHER 60S RIBOSOMAL PROTEIN L34 1 120 IPR008195 GO:0003735|GO:0005840|GO:0006412
Gma09g02192 120 ProSitePatterns Ribosomal protein L34e signature. 15 28 IPR018065 -
Gma09g02192 120 Gene3D - 39 120 - -
Gma09g02192 120 Pfam Ribosomal protein L34e 1 96 IPR008195 GO:0003735|GO:0005840|GO:0006412
Gma09g02192 120 Gene3D - 1 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02192 Gma-Chr9 47406832 47409187 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g02192 1 119 Cytoplasmic Ribosomal Protein Gene Family AT1G69620 91.597 1.07e-75 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02192 K02915 - gmx:100305798 219.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02365 18 57748948 57751470 Gma09g02192 09 47406832 47409187 GST