Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02190 ATGTGCATCCAGCAAAGGTTAGGCTTGGACACATGCATTACAACCCTATCAAGTAAAGAGGgggtcaagaaagggccttggactcctgaagaagacatcatattggtgtcttatattcaggaacatggtcctggaaattggagggcagttcctgccaaaacagggttgtcaagatgcagcaagagttgcagacttagatggacgaattacctgaggccAGGAATCAAGCGTGGTAACTTCACAGAACAAGAGGAGAAGATGATAATCCATCTTCAAGATCTTTTAGGAAACAGATGGGCTGCAATAGCTTCATACCTTCCACAAAGAACAGACAATGACATAAAGAACTATTGGAATACCCATTTGAGAAAGAAGCTGAAGAAGATGCAAGCAGGCGGTGAAGGTGGTAGCTTTGGAGAAGGGTTTTCAGCCTCAAGGCAAATCCCTAGAGGCCAGTGGGAAAGAAGGCTCCAAACTGATATCCAAATGGCAAAGAGAGCCCTCAGTGAAGCTCTTTCACCAGAGAAAAAGCCATCTTGTTTATCTGCCTCAAACTCAAACCCTTCAGATAGTAGCAGCTCCTTCTCTTCCACAAAACCAACAACAACACAATCTGTGTGCTATGCATCAAGTGCTGACAACATAGCTAGAATGCTCAAGGGTTGGATGAAGAACCCACCAAAGTCCTCAAGAACCAACTCGTCTATGACTCAGAACTCATTCAACAACTTAGCAGGTGCTGATACTGCTTGTAGTAGTGGAGCAAAGGGACCACTAAGCAGTGCCGAATTGTCTGAGAATAATTTTGAATCCTTGTTTGATTTTGATCAGTCTTTGGAGTCTTCAAACTCTGATCAATTCTCTCAGTCCTTGTCTCCTGAGGCCACTGTTTTGCAAGATGAAAGCAAGCCTGATATTAATATTGCTGCAGAAATTATGCCCTTCTCTTTGCTTGAGAAATGGCTCCTTGATGAGGCAGGTTGCCAAGAGAAATTAGTTGGTTGTTGTGGTGATGCCAAGTTTTTCTAA 1029 0.3635 MCIQQRLGLDTCITTLSSKEGVKKGPWTPEEDIILVSYIQEHGPGNWRAVPAKTGLSRCSKSCRLRWTNYLRPGIKRGNFTEQEEKMIIHLQDLLGNRWAAIASYLPQRTDNDIKNYWNTHLRKKLKKMQAGGEGGSFGEGFSASRQIPRGQWERRLQTDIQMAKRALSEALSPEKKPSCLSASNSNPSDSSSSFSSTKPTTTQSVCYASSADNIARMLKGWMKNPPKSSRTNSSMTQNSFNNLAGADTACSSGAKGPLSSAELSENNFESLFDFDQSLESSNSDQFSQSLSPEATVLQDESKPDINIAAEIMPFSLLEKWLLDEAGCQEKLVGCCGDAKFF 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02190 342 MobiDBLite consensus disorder prediction 129 151 - -
Gma09g02190 342 Gene3D - 79 134 - -
Gma09g02190 342 ProSiteProfiles Myb-like domain profile. 72 122 IPR001005 -
Gma09g02190 342 MobiDBLite consensus disorder prediction 178 203 - -
Gma09g02190 342 ProSiteProfiles Myb-like domain profile. 19 71 IPR001005 -
Gma09g02190 342 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 75 IPR017930 -
Gma09g02190 342 SUPERFAMILY Homeodomain-like 21 118 IPR009057 -
Gma09g02190 342 Gene3D - 23 76 - -
Gma09g02190 342 CDD SANT 79 122 IPR001005 -
Gma09g02190 342 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 76 126 IPR017930 -
Gma09g02190 342 PANTHER TRANSCRIPTION FACTOR MYB-HB-LIKE FAMILY-RELATED 18 335 - -
Gma09g02190 342 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 18 335 - -
Gma09g02190 342 CDD SANT 26 71 IPR001005 -
Gma09g02190 342 SMART sant 23 73 IPR001005 -
Gma09g02190 342 SMART sant 76 124 IPR001005 -
Gma09g02190 342 MobiDBLite consensus disorder prediction 168 203 - -
Gma09g02190 342 Pfam Myb-like DNA-binding domain 77 122 IPR001005 -
Gma09g02190 342 Pfam Myb-like DNA-binding domain 24 71 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02190 Gma-Chr9 47375727 47377396 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g02190 19 342 MYB Transcription Factor Family AT5G62470 49.041 1.90e-96 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gma09g02190 Myb_DNA-binding 4.9e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02190 K09422 - gmx:780543 609.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02367 18 57773473 57775155 Gma09g02190 09 47375727 47377396 GST
Gma13g00463 13 16919054 16920379 Gma09g02190 09 47375727 47377396 PCT
Gma19g00195 19 2474702 2476609 Gma09g02190 09 47375727 47377396 PCT
Gma09g02190 09 47375727 47377396 Gma13g00463 13 16919054 16920379 PCT
Gma09g02190 09 47375727 47377396 Gma19g00195 19 2474702 2476609 PCT