LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma09g02185	ATGGAGGGGACCAGCAGCCAAAGCACGTTTGCCTTCATCCCTAGCACAATTGAGACACCAAGTCCAAGCATCCCTGAGATATCATCATCATCTTCCCCTGGCTCTCTTGCAAGAATTGCACAAAGTTACCCTCCCGGCTTTCCCAGAAAGGTGTTAGCGGAGATTATAGGGACATTTTTGTTGGTGTTTGTGGGAAGTGGTTCTGCTGGGCTAAGCAAGATTGATGAGAGGATGGTGTCAAAGCTTGGAGCATCACTTGCAGGAGGACTCATAGTGACGGTCATGATATACTCAATTGGACACATATCAGGGGCACACATGAATCCCGCGGTTTCTCTTGCTTTCACCGCCGTCAGGCATCTTCCTTGGCCACAGCTCCCATTTTATATAGCAGCTCAACTCACTGGTGCCATTTCTGCTTCATACACATTGCGAGAGCTGTTACGACCATCAAATGAGATTGGAGGAACATCACCTGCTGGATCACACATTCAAGCCCTAATCATGGAAATGGTGACCACATATACCATGGTGTTCATTTCCATGGCCGTGGCCACTGACTCAAACGCGACAGGACAGCTATCAGGAGTAGCAGTAGGTTCTTCTGTTTGCATAGCAAGCATTGTAGCCGGACCAATATCAGGGGGATCAATGAATCCAGCAAGGACATTAGGTCCTGCAATTGCGACATCATACTACAAGGGACTTTGGGTATATTTTGTTGGACCTATTACTGGGGCGGTTTTAGCAGCTTGGTCTTACAATGTGATTAGGGACACTGAACACCCTGGTTTTCCCATTTCACTATCCTCCATTTCATCCAAGGTGCGCCAAAGCATTGGTGGAACTGAACAAAAAAGCGACCAAAGATGCTTGGTGTGA	882	0.4751	MEGTSSQSTFAFIPSTIETPSPSIPEISSSSSPGSLARIAQSYPPGFPRKVLAEIIGTFLLVFVGSGSAGLSKIDERMVSKLGASLAGGLIVTVMIYSIGHISGAHMNPAVSLAFTAVRHLPWPQLPFYIAAQLTGAISASYTLRELLRPSNEIGGTSPAGSHIQALIMEMVTTYTMVFISMAVATDSNATGQLSGVAVGSSVCIASIVAGPISGGSMNPARTLGPAIATSYYKGLWVYFVGPITGAVLAAWSYNVIRDTEHPGFPISLSSISSKVRQSIGGTEQKSDQRCLV	293

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma09g02185	293	SUPERFAMILY	Aquaporin-like	43	263	IPR023271	-
	Gma09g02185	293	PRINTS	Major intrinsic protein family signature	49	68	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Gma09g02185	293	PRINTS	Major intrinsic protein family signature	88	112	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Gma09g02185	293	PRINTS	Major intrinsic protein family signature	125	144	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Gma09g02185	293	PRINTS	Major intrinsic protein family signature	169	187	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Gma09g02185	293	PRINTS	Major intrinsic protein family signature	200	222	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Gma09g02185	293	PRINTS	Major intrinsic protein family signature	237	257	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Gma09g02185	293	Gene3D	Glycerol uptake facilitator protein.	28	263	IPR023271	-
	Gma09g02185	293	PANTHER	MAJOR INTRINSIC PROTEIN, AQUAPORIN-LIKE PROTEIN-RELATED	41	272	-	-
	Gma09g02185	293	Pfam	Major intrinsic protein	47	254	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Gma09g02185	293	ProSitePatterns	MIP family signature.	106	114	IPR022357	-
	Gma09g02185	293	PANTHER	AQUAPORIN NIP2-1	41	272	IPR034294	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma09g02185	Gma-Chr9	47289399	47294481	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma09g02185	49	263	Major Intrinsic Protein MIP	AT5G37820	47.685	4.98e-66	207

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma09g02185	K09874		-	gmx:100795261	533.102

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma18g02371	18	57851225	57856319	Gma09g02185	09	47289399	47294481	GST