LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma09g02184	ATGACAGAAAAACTTTCCAACAATCCATCCTTGAACGTGCCTTTACTATCCGAGTGGAATCACCATGATGAGGAGAAAGCCATAGCCTCTCATCCTTCTACCAAAAATACTGTGTCCTTCTTTCGCACATGCCTTAATGGACTCAATGCAATATCAGGTGTTGGAATACTGTCAGTTCCATATGCTCTTGCATCTGGAGGGTGGTTAAGCTTGGTTCTTCTATTTGCTATTGCCGCTGCAGCATTTTACACAGGCACGTTGATTAAAAGATGTATGGACAAGAATTCGAACATTAAAACCTACCCAGATATAGGTGAGCTTGCATTTGGAAAGATAGGAAGGCTAATAATATCAGTGTCCATGTACACGGAGCTCTACTTGGTTTCAATAGGGTTCTTGATTCTGGAAGGCGATAACTTGAATAACTTGTGCCCCATTGAAGAGGTTCAGATAGCTGGCTTCGTAATTGGTGGGAAGCAACTGTTTGTGATATTGGTTGCCCTTATCATCTTGCCCACAGTTTGGTTGGACAACTTGAGTATGCTTTCTTATGTATCTGCAAGTGGAGTGTTTGCTTCTGCTGTAATCATCCTATCAATATCATGGACTGGAACATTTGATGGAGTTGGTTTTCATCAAAAGGGAACTCTTGTTAATTGGCGCGGAATCCCCACAGCTGTTAGCTTGTATGCCTTTTGCTATTGTGCACATCCCGTCTTCCCCACCTTGTACAATTCCATGACTAACAAACATCAGTTCTCTAATGTCCTATTAGTATGCTTTCTGTTAACCACTGTGGGTTATGCATCCATGGCTATAATTGGTTATCTAATGTTTGGTGCTGACGTTGAATCACAAGTAACATTAAACCTGCCACTGAACAAAGTAAGCTCAAAATTAGCAATATATACAACCTTGGTCAATCCCATATCCAAGTTCGCTTTGATGGCAACACCAATTACCAATGCGTTGAAAGATTTACTTCCAAGGGCGTACAAGAATAGAGCGACCAACATCTTAGTCAGCACTGTCTTGGTAATAAGCGCTACCATTGTTGCCCTCAGTGTTCCTTTCTTTGGGGATCTCATGTCTCTGGTTGGAGCGTTTTTAAGTGTCACAGCTTCTATTCTGCTTCCATGCTTGTGTTACTTGAAGATTTCAGGCACTTACAATGAATTTGGGTGTGAGACCATAGCCATAGTGACAATAATAGTAGCAGCTATAGCAATGGGAATATCTGGAACATATACCTCTGTCATGGAAATAGTACATCATTTGTAA	1281	0.4114	MTEKLSNNPSLNVPLLSEWNHHDEEKAIASHPSTKNTVSFFRTCLNGLNAISGVGILSVPYALASGGWLSLVLLFAIAAAAFYTGTLIKRCMDKNSNIKTYPDIGELAFGKIGRLIISVSMYTELYLVSIGFLILEGDNLNNLCPIEEVQIAGFVIGGKQLFVILVALIILPTVWLDNLSMLSYVSASGVFASAVIILSISWTGTFDGVGFHQKGTLVNWRGIPTAVSLYAFCYCAHPVFPTLYNSMTNKHQFSNVLLVCFLLTTVGYASMAIIGYLMFGADVESQVTLNLPLNKVSSKLAIYTTLVNPISKFALMATPITNALKDLLPRAYKNRATNILVSTVLVISATIVALSVPFFGDLMSLVGAFLSVTASILLPCLCYLKISGTYNEFGCETIAIVTIIVAAIAMGISGTYTSVMEIVHHL	426

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma09g02184	426	Pfam	Transmembrane amino acid transporter protein	37	415	IPR013057	-
	Gma09g02184	426	PANTHER	AMINO ACID TRANSPORTER AVT1J	33	423	-	-
	Gma09g02184	426	PANTHER	OS05G0424000 PROTEIN-RELATED	33	423	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma09g02184	Gma-Chr9	47256636	47258922	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma09g02184	24	423	Amino Acid or Auxin Permease AAAP Family	AT3G28960	59.601	9.98e-176	495

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma09g02184	K15015		-	gmx:100794374	811.601

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma18g02372	18	57875086	57883032	Gma09g02184	09	47256636	47258922	GST