Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02177 ATGTCGGAGGCAAAAGACCCGGCGATCAAGCTCTTCGGGAAGACGATCCCGGTGCCGGAGATTCTGCCGGGATCCAACGGAGCTCCGGCTTCGTCTTCCGGTGATGTTGTTGTTGATGACAGTGTTGACGCTTCTTCCACCAACTCTTCAAGGGAGTCTCATACCAACACAGATGCACAAGAGAAAGATTTTGATAAGGACACATTGGGAGAAAAACCAACTGATGACAAGAAGGAAGATGGAGCCCCCGCCCAATCATCAGAAGAGGTCGCCAATCCAGATACTGCCTCTGGAACCTGTGAAGAATCCATCATCCAGTCCACCGAGAGGGAGGCTACTACATTGAAAACTACAAAGACTGAAGAAGAACAGGGCGAGACAAGTAATTCACAGGACAAGAACCTCAAAAAACCAGACAAAATACTACCTTGTCCTCGCTGTAATAGCATGGACACCAAGTTCTGCTATTATAATAATTACAATGTCAACCAACCCCGCCACTTCTGCAAGAATTGCCAGAGATACTGGACTGCTGGGGGGACCATGAGGAACGTTCCTGTAGGTGCTGGTCGCAGGAAGAACAAGAGCGTGGCTTCTCACTATCGCCAGATTACTGTTTCTGAAGCAGCCCTTCAGAATCCTAGAACGGACTTGCCAAATGGAGCATATCATCCTTCCTTGAAGTGCAATGGTACGGTCCTTACATTTGGAACTGATACACCCTTGTGTGAGTCAATGGCATCTGTTTTGAACCTTGCTGATAAAACCATGCACAATTACACAAGAAATGGATTTCATAAACCTGAGGAACTAAGAATTCCTGTTTCCCATGCCAGTGGAGAAAAAGGGGATGATCAATCTAATAAATCTTCGGTTACCTCCACAACATCTGTAGAAGGTGCAAGCACCAATAGACCCAAAGAACAGGTTATGCAGAATTGTCAGAGCTTTCCGTCACAGGTTCCCTACTTTCCTGGGACCCCTTGGCCCATCCCTTGGAATCCAGTGCAGTGGAGTTCTCCCGTACCACCGCCTGCTTTTTGTCCACCCGGATTTACCATGCCATTCTATCCTGCAACAGCTTATTGGGGTTGTGCTATGCCAGGCACGTGGAACATCCCATGGCTAGCGCAACCGTCATCACCAAATGGTGCAACACCTAACTCTGGCCCCAACTCCCCAACCTTGGGTAAACATTCAAGAGAAGACTACACATTCAAACCAAATGAGTCAGGTGGTGAGGATGGACACAGTAAAGAAAACAACAAAGAAAAGAGCCTGTGGGTTCCAAAAACTTTGAGGATTGATGACTCGGGAGAAGCGGCAAAAAGCTCTATATGGGCGACACTGGGGATTAAAAATGACAAGGCTGACTCAGTTCCTGGGGGAACACTCTTTAAAGCCTTCCCTTCAAAGCATGATGACAAAAACCATTCAATGCAATCCTCGCGGGTCTTGCTGGCCAATCCAGCAGCATTGTCTAGGTCACTTAACTTTCATGAGACCTCATAA 1512 0.4742 MSEAKDPAIKLFGKTIPVPEILPGSNGAPASSSGDVVVDDSVDASSTNSSRESHTNTDAQEKDFDKDTLGEKPTDDKKEDGAPAQSSEEVANPDTASGTCEESIIQSTEREATTLKTTKTEEEQGETSNSQDKNLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKSVASHYRQITVSEAALQNPRTDLPNGAYHPSLKCNGTVLTFGTDTPLCESMASVLNLADKTMHNYTRNGFHKPEELRIPVSHASGEKGDDQSNKSSVTSTTSVEGASTNRPKEQVMQNCQSFPSQVPYFPGTPWPIPWNPVQWSSPVPPPAFCPPGFTMPFYPATAYWGCAMPGTWNIPWLAQPSSPNGATPNSGPNSPTLGKHSREDYTFKPNESGGEDGHSKENNKEKSLWVPKTLRIDDSGEAAKSSIWATLGIKNDKADSVPGGTLFKAFPSKHDDKNHSMQSSRVLLANPAALSRSLNFHETS 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02177 503 MobiDBLite consensus disorder prediction 378 399 - -
Gma09g02177 503 MobiDBLite consensus disorder prediction 277 310 - -
Gma09g02177 503 ProSitePatterns Zinc finger Dof-type signature. 144 180 IPR003851 GO:0003677|GO:0006355
Gma09g02177 503 MobiDBLite consensus disorder prediction 285 310 - -
Gma09g02177 503 Pfam Dof domain, zinc finger 139 196 IPR003851 GO:0003677|GO:0006355
Gma09g02177 503 MobiDBLite consensus disorder prediction 400 425 - -
Gma09g02177 503 MobiDBLite consensus disorder prediction 1 141 - -
Gma09g02177 503 MobiDBLite consensus disorder prediction 378 425 - -
Gma09g02177 503 MobiDBLite consensus disorder prediction 55 84 - -
Gma09g02177 503 MobiDBLite consensus disorder prediction 114 140 - -
Gma09g02177 503 MobiDBLite consensus disorder prediction 26 54 - -
Gma09g02177 503 PANTHER CYCLIC DOF FACTOR 2 1 502 IPR045174 GO:0003700|GO:0006355
Gma09g02177 503 PANTHER DOF-TYPE ZINC FINGER DNA-BINDING FAMILY PROTEIN 1 502 - -
Gma09g02177 503 MobiDBLite consensus disorder prediction 88 113 - -
Gma09g02177 503 ProSiteProfiles Zinc finger Dof-type profile. 142 196 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02177 Gma-Chr9 47191611 47195475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g02177 6 503 C2C2-Dof Transcription Factor Family AT5G39660 46.272 2.31e-116 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Gma09g02177 zf-Dof 1.9e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02177 - - gmx:100784308 979.933