Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02163 ATGGAAGGACCATCAAGTGTGAGAAAAGGCGCATGGAGTAAATGCGAAGACGACCTTCTAAGAGCTTGCGTGCAACTTTATGGGGAAGGAAAATGGCACCTTGTTCCTCAAAGAGCTGGGTTGAACAGGTGCCGCAAGAGCTGTAGATTGAGATGGCTGAACTATCTAAAACCAAATATCAAGAGGGGAGATTTCAGTGAAGATGAGGTTGACATGATGATCAGAATGCATAAGCTTTTGGGAAACAGATGGTCCCTGATTGCGGGAAGACTTCCGGGAAGAACTTCAAACGATGTGAAAAATTACTGGAACACCTACATGCGCCGTAAAGTATACTCTCACAAGAAAGACAACAACGTAGAGAAGCAAGCTGATGAGGCCAAATCAACAGTGCAACGGCACCAAGTGATAAAGCCTATACCTCGAGCTTTAACAAAAACAGCCCCACGGTTGCAAGGGAAATTGTTTAATAGTTCCAAAGTCGGTGTTAGTGAAGCAGCAGGTGCAGCTTCATCAGGGTCTGGCAATTGGTGGGAAACTTTGTTAGAAAACAAGAAAGACAATCATGAAGGTAACATTATTAATAACACGTGCTTCTTTGGTGGGGCAGATGGAGAGCTTGACCTTTGGGATGAGGAGCTTAATCCAATTGCTTGTGACTTTCTTTCTGAAGGTGAAAATTGGAGTGATTTTCTTCTTGACTTATAG 708 0.435 MEGPSSVRKGAWSKCEDDLLRACVQLYGEGKWHLVPQRAGLNRCRKSCRLRWLNYLKPNIKRGDFSEDEVDMMIRMHKLLGNRWSLIAGRLPGRTSNDVKNYWNTYMRRKVYSHKKDNNVEKQADEAKSTVQRHQVIKPIPRALTKTAPRLQGKLFNSSKVGVSEAAGAASSGSGNWWETLLENKKDNHEGNIINNTCFFGGADGELDLWDEELNPIACDFLSEGENWSDFLLDL 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02163 235 ProSiteProfiles Myb-like domain profile. 4 56 IPR001005 -
Gma09g02163 235 SUPERFAMILY Homeodomain-like 7 103 IPR009057 -
Gma09g02163 235 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 56 IPR017930 -
Gma09g02163 235 Pfam Myb-like DNA-binding domain 9 56 IPR001005 -
Gma09g02163 235 Pfam Myb-like DNA-binding domain 62 106 IPR001005 -
Gma09g02163 235 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 57 111 IPR017930 -
Gma09g02163 235 Gene3D - 9 61 - -
Gma09g02163 235 ProSiteProfiles Myb-like domain profile. 57 107 IPR001005 -
Gma09g02163 235 CDD SANT 11 56 IPR001005 -
Gma09g02163 235 Gene3D - 64 138 - -
Gma09g02163 235 CDD SANT 65 107 IPR001005 -
Gma09g02163 235 PANTHER TRANSCRIPTION FACTOR MYB113-RELATED 6 148 - -
Gma09g02163 235 SMART sant 61 109 IPR001005 -
Gma09g02163 235 SMART sant 8 58 IPR001005 -
Gma09g02163 235 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 6 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02163 Gma-Chr9 47068899 47070222 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g02163 2 145 MYB Transcription Factor Family AT1G66370 58.389 1.02e-57 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gma09g02163 Myb_DNA-binding 1.3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02163 - K16166 gmx:100781091 475.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02397 18 58098109 58099824 Gma09g02163 09 47068899 47070222 GST