Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02156 ATGGCAGCTTGCATATTCACGGTGGCACAGGACGGAACCGCAGATTTCCAAACGGTGCAGGAGGCGATCGACGCCGTGCCGCTCGGCAACATTCGGCGGACGGTGATTCGGGTGTCGCCGGGAATCTACCGGCAACCGGTGTATGTCCCCAAGACCAAGAATTTCATCACTCTCGCCGCTCTCAGCCCCGAGGACACTGTGCTTACCTGGAACAACACTGCCACCGGAATCGATCACCACCAACCTGCGAGGGTGATAGGGACTGGGACGTTTGGTTGTGGAAGTACCATTGTGGAAGGGGAGGACTTTATTGCTGAGAATATTACATTTGAGAATTCTGCGCCTGAGGGTTCAGGGCAAGCAGTTGCAATTAGAGTAACGGCAGATCGATGTGCTTTCTACAATTGCAGGTTCCTTGGATGGCAGGACACACTATACTTACATTATGGTAAACAATATTTGAAAGATTGCTACATTGAAGGAAGTGTGGACTTCATCTTTGGCAACAGCACTGCTCTTTTGGAGCACTGTCATATCCACTGCAAGTCTGCAGGCTTCATAACCGCACAGAGCAGAAAATCATCACAGGAAACAACTGGTTATGTATTCTTAAGATGTGTTATCACAGGCAATGGAGGAAATTCATATGCATATCTTGGACGACCGTGGGGCCCTTTTGGAAGGGTGGTCTTTGCATACACTTACATGGATCAATGTATAAGGCATGTTGGCTGGGATAACTGGGGGAAAATGGAGAATGAAAGAAGTGCTTGCTTTTATGAATACAGGTGTTTTGGACCTGGTTGCTGTCCATCAAAACGAGTAACGTGGTGTAGAGAATTGTTGGATGAAGAAGCTGAGCAGTTCCTCACGCATCCTTTCATTGATCCAGAACTGGAGAAACCTTGGCTTGCTCAAAGGATGGCCCTCAGGATTCCATATTCTGCTTGA 951 0.4816 MAACIFTVAQDGTADFQTVQEAIDAVPLGNIRRTVIRVSPGIYRQPVYVPKTKNFITLAALSPEDTVLTWNNTATGIDHHQPARVIGTGTFGCGSTIVEGEDFIAENITFENSAPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHCKSAGFITAQSRKSSQETTGYVFLRCVITGNGGNSYAYLGRPWGPFGRVVFAYTYMDQCIRHVGWDNWGKMENERSACFYEYRCFGPGCCPSKRVTWCRELLDEEAEQFLTHPFIDPELEKPWLAQRMALRIPYSA 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02156 316 Gene3D - 4 311 IPR012334 -
Gma09g02156 316 SUPERFAMILY Pectin lyase-like 3 300 IPR011050 -
Gma09g02156 316 Pfam Pectinesterase 7 296 IPR000070 GO:0030599|GO:0042545
Gma09g02156 316 ProSitePatterns Pectinesterase signature 2. 159 168 IPR033131 -
Gma09g02156 316 PANTHER PECTINESTERASE 1 315 - -
Gma09g02156 316 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 1 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02156 Gma-Chr9 47012547 47015733 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g02156 5 309 Carbohydrate Esterase AT5G47500 37.580 9.35e-70 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02156 K01051 - gmx:100786786 672.93