Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma09g02149 | ATGACTCCAGTTAATTTGGCTGGCCAGTTTGGTGACACAACATACACTAAGGTGTTTGTTGGAGGCTTGGCCTGGGAGACTCAAAAGGAGACAATGAAGAAGTATTTTGAGCAATTTGGTGAGATCTTGGAGGCTGTTGTCATCACTGACAAAGCCACTGGAAGATCTAAAGGCTATGGATTTGTTACTTTTCGTGAACCAGAAGCTGCCATGAGAGCTTGTGTGGATCCTGCTCCTGTAATCGACGGTAGGAGAGCTAACTGCAACCTTGCTTCTTTGGGTGTCCAGAGATCTAAGCCTTCAACCCCAAAACATGGAGGAGGAGGAAGGAACTTTAGAGTAATGGGTTCTTTCCAGACAGGATTTGGAGGGGGAGTGGGATCGTCTTTTCCTTCAGCAGCAACCTTCCCTCATTATGCCATCCAGCAAGGGATACCTTATAATGTTTATGGGTACTCTCCTTACTCGCCGGATTACACTTACCCTACGAGCTACTATGGTGTGTATGGAGGAGCAACAGCACAGTACCCGGTTTATGGAAGTGGAGCTGCTGCTGCAGCGTTCTACCCATATCTGCAGTACGGAGAAGGGAGTGGCGGTGGCGGAACTAGCGGCGGCTACAGTTCCGGACAGGGTTATGGTGTGAACTACCCTCCTCAGGCTCACCTCTTTCAGTATTCTCCCATTGCTTCCACTGCAGCCGCCACAGCTGGCTATGCCCAGCACTATGGAACACCAGCTATGTCTCTTGCTCCTTCCCCTGCCTTGCAATCAGTGTGTTTTGCTGTGCCGCAGGCGTGA | 801 | 0.5019 | MTPVNLAGQFGDTTYTKVFVGGLAWETQKETMKKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDPAPVIDGRRANCNLASLGVQRSKPSTPKHGGGGRNFRVMGSFQTGFGGGVGSSFPSAATFPHYAIQQGIPYNVYGYSPYSPDYTYPTSYYGVYGGATAQYPVYGSGAAAAAFYPYLQYGEGSGGGGTSGGYSSGQGYGVNYPPQAHLFQYSPIASTAAATAGYAQHYGTPAMSLAPSPALQSVCFAVPQA | 266 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma09g02149 | 266 | PANTHER | OS01G0876800 PROTEIN | 1 | 261 | - | - | |
Gma09g02149 | 266 | SUPERFAMILY | RNA-binding domain, RBD | 12 | 112 | IPR035979 | GO:0003676 | |
Gma09g02149 | 266 | PANTHER | BOULE-RELATED | 1 | 261 | IPR037366 | GO:0003729 | |
Gma09g02149 | 266 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 16 | 100 | IPR000504 | GO:0003723 | |
Gma09g02149 | 266 | Gene3D | - | 7 | 112 | IPR012677 | - | |
Gma09g02149 | 266 | SMART | rrm1_1 | 17 | 89 | IPR000504 | GO:0003723 | |
Gma09g02149 | 266 | CDD | RRM_RBM24_RBM38_like | 16 | 91 | - | - | |
Gma09g02149 | 266 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 18 | 73 | IPR000504 | GO:0003723 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma09g02149 | Gma-Chr9 | 46947451 | 46953007 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma09g02149 | 12 | 92 | C2H2 Transcription Factor Family | AT2G19380 | 44.444 | 2.15e-15 | 73.9 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma09g02149 | - | - | gmx:100781647 | 480.715 |